Lactococcus protaetiae: FLP15_12160
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Entry
FLP15_12160 CDS
T06341
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lack
Lactococcus protaetiae
Pathway
lack03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lack00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FLP15_12160 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lack03400
]
FLP15_12160 (uvrA)
DNA repair and recombination proteins [BR:
lack03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FLP15_12160 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FLP15_12160 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_33
Viral_helicase1
AAA_22
AAA_21
NACHT
AAA_23
nSTAND3
SLFN-g3_helicase
AAA_14
cobW
ATPase
DnaJ_CXXCXGXG
T2SSE
BCA_ABC_TP_C
Septin
RNA_helicase
Frankia_peptide
NTPase_1
MMR_HSR1
NB-ARC
IIGP
Dynamin_N
DUF87
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
QDK71789
UniProt:
A0A514ZB37
LinkDB
All DBs
Position
complement(2580910..2583732)
Genome browser
AA seq
940 aa
AA seq
DB search
MPQDKIIIHGAREHNLKNIDVEIPRDKLVVVTGVSGSGKSSLAFETLYAEGQRRYVESLS
AYARQFLGNMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTP
YCINGHGKISAQSVEEIVEQILELPEKTRLQILAPVVRGKKGTHVKMFERIQKDGYVRVR
VNGEVYDVSDAPELDKNKKHNIEIVIDRIVVKEGIRSRLFDSVEAALHQAEGYVIVDKMD
GEELLFSEFYACPVCGFTVPELEPRLFSFNAPFGSCPDCDGLGLKLEPDVDLIIPDGTKT
LREGAIVYWYGKASTYYPALLEQAMTQFGVDLDTPWEELSEKDQNLVLHGSGERLFHFYH
EGDFGLRDQDMTFVGVIPNLWRRFQSGMTESAREMARAYMTELTCTTCHGYRLNDQALSV
KVGEKNIAEFSILSIGDTLDYVGTLHLSENNEIIAKPILKEIKDRLTFLKNVGLDYLTLS
RSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLQKMRDLGNTL
IVVEHDEDTMMAADWLIDVGPGAGDLGGEIIASGTPKQVMKNKKSLTGQYLAGKRSIPVP
EKRRAIDNKKMVKVFGAGENNLQNIDAEFPLGLMTVVTGVSGSGKSTLVNSILKKALAQK
LNHNSEKPGKHKKLTGYEGIERLIDIDQSPIGRTPRSNPATYTSTFDDIRDLFANTNEAK
IRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGKRYNSETLEVHYKG
KNISEVLDMRVSDALDFFRHIPKIERKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLAS
ELQKRSTGKSFYILDEPTTGLHSEDIATLIKVLDRLVDQGNTIVVIEHNLDVIKTADYII
DLGPEGGSGGGTILAKGTPEEVAEVANSYTGHYLKAKLEK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagataaaatcatcattcacggagcgcgtgaacataatctaaaaaatattgat
gttgaaattcctcgagacaaacttgtcgttgtcacaggtgtttcgggttctgggaagtcc
tcacttgcctttgaaactttgtatgcagaagggcaacgtcgttatgttgagtcattgtct
gcttatgccagacagtttttaggtaatatggataaacctgatgtagatagtattgacggt
ttgtcgcctgcaatttccattgaccaaaaaacaaccagtaaaaatccacgttcaacggtg
ggcacagtgacggaaatcaatgattatctgcgccttttgtatgctcgtgttggtacgcct
tattgtatcaatggacatggaaaaatttctgctcaatctgttgaggaaattgtcgaacaa
atccttgaattaccagaaaaaacacggctacaaatccttgctcctgttgtaagaggtaaa
aaaggaacgcatgtcaagatgtttgagcgtatccaaaaagatgggtacgttcgtgttcgt
gttaatggcgaggtttatgatgtttctgatgcaccagagttagataaaaataaaaaacat
aatattgaaatcgtcattgaccgtattgtagtcaaagaaggtattcgttcacgtctattt
gactctgttgaagcagcacttcaccaagcagaaggttatgtgattgtggataaaatggat
ggtgaagaacttttatttagtgagttttatgcttgcccagtttgtgggtttacggtgccc
gagctggaaccgcgtttgttctcattcaatgcaccatttggttcttgccctgactgtgat
ggtttggggcttaagttagagcctgatgtggatttgattattccagatgggacaaaaact
ttgcgtgaaggtgcgattgtttattggtatggtaaagcgtctacttattatccagcactt
ttagaacaagcaatgacacaatttggtgtagatttagatacaccttgggaggaattatcg
gagaaagatcaaaatcttgtcttgcatggttctggggaacgtttatttcatttttatcat
gaaggtgattttggactacgtgaccaagatatgacttttgttggtgtgattcctaatcta
tggcgtcgttttcagtctggaatgacagagtcagcacgtgaaatggcgcgagcttacatg
acagagttgacttgtacaacttgtcatggctatcgcttgaatgatcaagcgttgtctgtc
aaagttggcgaaaaaaatattgcagaattttctattttgtcaattggagatacgcttgac
tatgtagggacgcttcatttatctgaaaacaatgaaattattgcaaaaccgattttgaaa
gagattaaagaccgtttgactttcttgaaaaatgtagggctagattatctgaccttatca
cgctctagtgggactttatcgggtggtgagtcgcaacggataagacttgcgacacagatt
gggtcaaatttgtcaggagttttgtatattttagatgaaccctcgattgggcttcaccaa
agagataacgaccgattgattgaatctttgcaaaagatgcgtgatttgggaaatactttg
attgtggtggagcatgatgaggatacgatgatggcggcggactggttgattgatgttgga
cctggtgcgggggacttaggcggagaaatcattgcctctggaacaccaaaacaagtgatg
aaaaataaaaaatcactgacagggcagtatttggcaggtaaacgcagtattccagtacct
gaaaaacgacgtgcaattgataataagaaaatggtcaaagtgtttggtgctggcgaaaat
aatttacagaatattgatgctgaatttcctcttggattgatgacggtagtcacaggggtt
tctggttctggaaaatcgacgttagtcaacagtattttgaagaaagctttagctcaaaaa
ttgaatcataattctgaaaaaccagggaagcacaagaaattgacaggttatgaaggtatc
gagcgcttgatcgatattgaccaatctccgattggacggacaccacggtcaaatcctgcg
acttatacttcaacttttgatgatattcgtgatttgtttgccaatacgaatgaagcaaaa
attcgtggttataaaaaaggacgtttctcttttaatgtcaagggcggacgttgcgaggct
tgctcaggtgacggaattatcaagattgaaatgcactttttgccggatgtctatgtgccc
tgtgaagtttgtcatggaaaacgttataattctgaaactttagaagtacattataaaggg
aaaaatatctcggaagtattggatatgcgtgtgtctgatgcgttagatttcttccgccat
attccaaaaattgaacgtaaattgcaaacgattgttgatgtcggattgggctatgttaca
ctcggacagcctgcaacgacgctttcaggtggtgaagcgcagcggatgaaattggcatct
gaattacaaaaacgaagcacaggtaaatctttttatattttggacgaaccgacaacggga
cttcattcagaagatattgcaactttgattaaagttttagaccgtttggttgaccaagga
aatacgattgttgtcattgagcataatcttgatgtaattaagacagcagattatatcatt
gatctcggacctgaaggaggctctggtggtggaaccattcttgctaaaggaacgccagaa
gaagttgccgaagttgctaacagttatacaggacactatttgaaagcaaaattagagaaa
tga
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