KEGG   Lactococcus protaetiae: FLP15_12160
Entry
FLP15_12160       CDS       T06341                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
lack  Lactococcus protaetiae
Pathway
lack03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lack00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FLP15_12160 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lack03400]
    FLP15_12160 (uvrA)
DNA repair and recombination proteins [BR:lack03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FLP15_12160 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FLP15_12160 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 AAA_33 Viral_helicase1 AAA_22 AAA_21 NACHT AAA_23 nSTAND3 SLFN-g3_helicase AAA_14 cobW ATPase DnaJ_CXXCXGXG T2SSE BCA_ABC_TP_C Septin RNA_helicase Frankia_peptide NTPase_1 MMR_HSR1 NB-ARC IIGP Dynamin_N DUF87 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: QDK71789
UniProt: A0A514ZB37
LinkDB
Position
complement(2580910..2583732)
AA seq 940 aa
MPQDKIIIHGAREHNLKNIDVEIPRDKLVVVTGVSGSGKSSLAFETLYAEGQRRYVESLS
AYARQFLGNMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTP
YCINGHGKISAQSVEEIVEQILELPEKTRLQILAPVVRGKKGTHVKMFERIQKDGYVRVR
VNGEVYDVSDAPELDKNKKHNIEIVIDRIVVKEGIRSRLFDSVEAALHQAEGYVIVDKMD
GEELLFSEFYACPVCGFTVPELEPRLFSFNAPFGSCPDCDGLGLKLEPDVDLIIPDGTKT
LREGAIVYWYGKASTYYPALLEQAMTQFGVDLDTPWEELSEKDQNLVLHGSGERLFHFYH
EGDFGLRDQDMTFVGVIPNLWRRFQSGMTESAREMARAYMTELTCTTCHGYRLNDQALSV
KVGEKNIAEFSILSIGDTLDYVGTLHLSENNEIIAKPILKEIKDRLTFLKNVGLDYLTLS
RSSGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLQKMRDLGNTL
IVVEHDEDTMMAADWLIDVGPGAGDLGGEIIASGTPKQVMKNKKSLTGQYLAGKRSIPVP
EKRRAIDNKKMVKVFGAGENNLQNIDAEFPLGLMTVVTGVSGSGKSTLVNSILKKALAQK
LNHNSEKPGKHKKLTGYEGIERLIDIDQSPIGRTPRSNPATYTSTFDDIRDLFANTNEAK
IRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGKRYNSETLEVHYKG
KNISEVLDMRVSDALDFFRHIPKIERKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLAS
ELQKRSTGKSFYILDEPTTGLHSEDIATLIKVLDRLVDQGNTIVVIEHNLDVIKTADYII
DLGPEGGSGGGTILAKGTPEEVAEVANSYTGHYLKAKLEK
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgccacaagataaaatcatcattcacggagcgcgtgaacataatctaaaaaatattgat
gttgaaattcctcgagacaaacttgtcgttgtcacaggtgtttcgggttctgggaagtcc
tcacttgcctttgaaactttgtatgcagaagggcaacgtcgttatgttgagtcattgtct
gcttatgccagacagtttttaggtaatatggataaacctgatgtagatagtattgacggt
ttgtcgcctgcaatttccattgaccaaaaaacaaccagtaaaaatccacgttcaacggtg
ggcacagtgacggaaatcaatgattatctgcgccttttgtatgctcgtgttggtacgcct
tattgtatcaatggacatggaaaaatttctgctcaatctgttgaggaaattgtcgaacaa
atccttgaattaccagaaaaaacacggctacaaatccttgctcctgttgtaagaggtaaa
aaaggaacgcatgtcaagatgtttgagcgtatccaaaaagatgggtacgttcgtgttcgt
gttaatggcgaggtttatgatgtttctgatgcaccagagttagataaaaataaaaaacat
aatattgaaatcgtcattgaccgtattgtagtcaaagaaggtattcgttcacgtctattt
gactctgttgaagcagcacttcaccaagcagaaggttatgtgattgtggataaaatggat
ggtgaagaacttttatttagtgagttttatgcttgcccagtttgtgggtttacggtgccc
gagctggaaccgcgtttgttctcattcaatgcaccatttggttcttgccctgactgtgat
ggtttggggcttaagttagagcctgatgtggatttgattattccagatgggacaaaaact
ttgcgtgaaggtgcgattgtttattggtatggtaaagcgtctacttattatccagcactt
ttagaacaagcaatgacacaatttggtgtagatttagatacaccttgggaggaattatcg
gagaaagatcaaaatcttgtcttgcatggttctggggaacgtttatttcatttttatcat
gaaggtgattttggactacgtgaccaagatatgacttttgttggtgtgattcctaatcta
tggcgtcgttttcagtctggaatgacagagtcagcacgtgaaatggcgcgagcttacatg
acagagttgacttgtacaacttgtcatggctatcgcttgaatgatcaagcgttgtctgtc
aaagttggcgaaaaaaatattgcagaattttctattttgtcaattggagatacgcttgac
tatgtagggacgcttcatttatctgaaaacaatgaaattattgcaaaaccgattttgaaa
gagattaaagaccgtttgactttcttgaaaaatgtagggctagattatctgaccttatca
cgctctagtgggactttatcgggtggtgagtcgcaacggataagacttgcgacacagatt
gggtcaaatttgtcaggagttttgtatattttagatgaaccctcgattgggcttcaccaa
agagataacgaccgattgattgaatctttgcaaaagatgcgtgatttgggaaatactttg
attgtggtggagcatgatgaggatacgatgatggcggcggactggttgattgatgttgga
cctggtgcgggggacttaggcggagaaatcattgcctctggaacaccaaaacaagtgatg
aaaaataaaaaatcactgacagggcagtatttggcaggtaaacgcagtattccagtacct
gaaaaacgacgtgcaattgataataagaaaatggtcaaagtgtttggtgctggcgaaaat
aatttacagaatattgatgctgaatttcctcttggattgatgacggtagtcacaggggtt
tctggttctggaaaatcgacgttagtcaacagtattttgaagaaagctttagctcaaaaa
ttgaatcataattctgaaaaaccagggaagcacaagaaattgacaggttatgaaggtatc
gagcgcttgatcgatattgaccaatctccgattggacggacaccacggtcaaatcctgcg
acttatacttcaacttttgatgatattcgtgatttgtttgccaatacgaatgaagcaaaa
attcgtggttataaaaaaggacgtttctcttttaatgtcaagggcggacgttgcgaggct
tgctcaggtgacggaattatcaagattgaaatgcactttttgccggatgtctatgtgccc
tgtgaagtttgtcatggaaaacgttataattctgaaactttagaagtacattataaaggg
aaaaatatctcggaagtattggatatgcgtgtgtctgatgcgttagatttcttccgccat
attccaaaaattgaacgtaaattgcaaacgattgttgatgtcggattgggctatgttaca
ctcggacagcctgcaacgacgctttcaggtggtgaagcgcagcggatgaaattggcatct
gaattacaaaaacgaagcacaggtaaatctttttatattttggacgaaccgacaacggga
cttcattcagaagatattgcaactttgattaaagttttagaccgtttggttgaccaagga
aatacgattgttgtcattgagcataatcttgatgtaattaagacagcagattatatcatt
gatctcggacctgaaggaggctctggtggtggaaccattcttgctaaaggaacgccagaa
gaagttgccgaagttgctaacagttatacaggacactatttgaaagcaaaattagagaaa
tga

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