Ligilactobacillus agilis: BEN83_02080
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Entry
BEN83_02080 CDS
T05198
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lagl
Ligilactobacillus agilis
Brite
KEGG Orthology (KO) [BR:
lagl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lagl03009
]
BEN83_02080
Enzymes [BR:
lagl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BEN83_02080
Ribosome biogenesis [BR:
lagl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BEN83_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ASR40351
UniProt:
A0A222W2Z1
LinkDB
All DBs
Position
390842..391555
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AA seq
237 aa
AA seq
DB search
MRLDKFLAASGVGSRSEVKQLLKQKRITVAGKVVTSPKIQVEADSQVELDHQPVNYQTNY
YLLMNKPKGVITATTDKSQRTVIDLLGAGEQKLGLFPVGRLDKDTTGLLLLTTDGELAHR
LLAPKKHVSKVYQAKIEGIVTDQTVARFAKPLTLKNGEVTKPAKLEVISGQKDANISRVI
IEITEGKYHQVKRMFAAVGMHVLELHRLKMGQLELPADLKPGQYRPLTKEELASLTK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaggttagataagtttttagcagctagtggagttgggtcaaggtcagaagtaaagcag
cttttaaagcaaaagcggataactgttgctggcaaagtagtaactagtcccaaaatccaa
gtcgaagcagatagtcaggttgaattagaccatcaaccagttaactatcaaacaaattac
tacttgcttatgaacaaacccaagggggtaatcaccgccactactgataagagccaaagg
acggttatagatttattaggagcgggggaacaaaaattaggcctttttccagtgggacga
ttagataaagatacaacgggattgttattattaacaactgatggggagttagcccatagg
ctgttagcacccaaaaagcacgtaagtaaggtgtatcaagctaagattgaagggatagtg
actgaccaaacggttgctaggtttgctaagccattaacccttaaaaatggagaggttact
aagccagctaagttagaagtaattagcggtcaaaaagacgcaaatatttcccgggtaata
attgaaattacggaaggaaagtatcaccaagtaaagcggatgtttgcagcggtggggatg
catgttttggaattacaccgtttaaagatgggacaactagaattaccagcagacttaaag
cctggccagtatcgacccctgacaaaagaagagttagcctcactgactaagtaa
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