KEGG   Lingula anatina: 106165996Help
Entry
106165996         CDS       T04921                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
lak  Lingula anatina
Pathway
lak03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    106165996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lak03400]
    106165996
Enzymes [BR:lak01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106165996
DNA repair and recombination proteins [BR:lak03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     106165996
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C RNA_ligase DNA_ligase_IV BRCT LIG3_BRCT
Motif
Other DBs
NCBI-GeneID: 106165996
NCBI-ProteinID: XP_013399844
UniProt: A0A1S3IQM4
LinkDB All DBs
Position
Unknown
AA seq 906 aa AA seqDB search
MTTVASKVPFSELAGLLEKISKKQGADKKLLLQEFINRWRDFHGKLHADDANTTDSFYSA
LRLLLPHLERERAAYGIKENTLAKLYIEVLCLGKDSPAADKLIKYRAPKNAKGDAGDFAT
VAYFVLKPRCPEKGSLTIEEVNQCLDGIATNQTTGKKDLVRKNILHLLRNLSALEQKWLI
RMIMKELKCGLSQQAILNVFHPDANEYFNVTTSLEKVCANLKDPSTRMHEIEISVGAPFH
PMLGELAVPKQLDKIMEGKMFYIEIKFDGERMQLHKKEDEYMYFSRNGHNYSRTFGENPY
DGNLTPYIANCFKPGVKNCILDGEMVGIHPETKIIRTKGENFDIKSDTNLDGYQPCLCVF
DILLLNDRVLSNLPLRERKEILKDVFNPVECRMFIAESKEATTSKECLQALNDAIDKREE
GIMVKNPDSVYKPSVRKGGWYKIKPEYMRGLGDDLDVLVVGGYFGVGARGGLVSHFLCAV
AEPFEPGEKPSKFRSFCRVGSGYSRKELFEFNRRMQDKWIPYSDRKGPPSWLILGREKPS
LLVEPSDSTILQIKASEITSDSDKFGTGCTLRFPRVEKIRSDKPWHECLTFTELKELQEQ
FAGKLAGRHADEDHEDEPIKKKKKVVVRQEKPLVAPQFRATDTSQVKKVSELFEDKEFCV
VNGSSKHSKASLEKKIVEYGGTAVQHPGPETFCVLCDKVQMKVKNIISTNKHDVVKLDWL
VRCTEARRLLPWVPSDMLHARPETEALFKQNYDDYGDSYTEDTTIDQLMVVFKKVQEEGK
LKPVSTDFIAEIENKYFVEGSTYGLFRLCRVYLDDNTVIGDKSTHIKDCSLELTSLELRM
YGATLCEMLNEDVTHVVLCDRDLGRIDKFRSLNRSRWQKFHIVTQDWVSDCIDNGKILGE
RGYEPA
NT seq 2721 nt NT seq  +upstreamnt  +downstreamnt
atgactacggttgcttccaaagttccattttccgaacttgcaggactactcgagaaaata
agcaaaaagcaaggagcggacaaaaaacttctgctgcaagaattcattaaccgctggcgt
gatttccatggaaagttgcatgcagacgatgctaatacgacagacagtttctattcagca
ttaagacttctgctaccccatttggagcgagaaagagctgcatatggcattaaggagaac
acacttgccaagctgtatatagaagtgctgtgcctgggaaaggacagccctgctgcagac
aagttgattaaatacagagctcccaagaatgctaaaggggatgctggtgattttgcaact
gtggcctactttgtgctgaagccccgctgcccagagaagggaagtttgaccatcgaggaa
gtgaaccagtgcctagatggtattgccacaaatcagaccacaggaaagaaagatttagtg
agaaaaaatattctgcatctgttgaggaacctgtcagctcttgagcagaaatggttgata
aggatgatcatgaaggagttgaagtgtggtttaagtcaacaggccattttaaatgtcttt
caccctgatgccaatgaatatttcaatgtgaccacaagtttagaaaaggtgtgtgcaaat
cttaaagatcctagcactcgtatgcatgagatagagatatcagtgggtgcccccttccat
ccaatgttgggagagctagcagtgcccaaacagcttgataaaattatggaaggaaagatg
ttctacatagaaatcaagtttgatggagagcgtatgcagctacacaagaaagaggatgaa
tatatgtatttctcaagaaatggtcacaattactccagaacctttggtgaaaatccttat
gatggaaatttaaccccatatattgctaactgcttcaagccaggagtgaaaaattgcatt
cttgatggagaaatggtaggaatacacccagaaacaaaaataattagaaccaaaggagaa
aattttgacataaaatctgacactaacctagatggttaccagccttgtctttgtgtgttt
gatatcctgttgctgaatgatagagttctgtccaaccttccactcagagaaaggaaggaa
atactgaaggatgtctttaatccagttgaatgcagaatgtttattgctgaaagcaaagag
gcaaccacaagcaaggagtgtcttcaagcattgaatgatgccattgacaagagagaagag
gggatcatggtgaagaacccagactctgtgtacaaacccagtgtgcgcaaaggtggctgg
tacaagatcaagcctgagtacatgaggggtttgggagatgacctagatgtcctggtggtg
ggagggtactttggtgtgggggccagagggggactggtgtcacacttcctgtgtgctgtg
gctgagccctttgagcctggagagaagccctccaaattcaggtcattttgtcgggtggga
tccggatatagcaggaaagagctgtttgaattcaacaggcgtatgcaagataaatggatt
ccatattcagacaggaaagggccccccagttggctaatattgggcagggaaaagcccagt
ctcttggtagaaccctcagattccactatactgcaaatcaaagcctctgagatcacctca
gacagtgacaagtttggcactgggtgtaccttgagatttccacgtgtagaaaaaatacgc
tctgacaagccatggcatgaatgcttgacatttacagaattgaaggagctacaggagcaa
tttgctggtaagctagcaggtcgccatgcagatgaggaccatgaagatgaaccgataaag
aaaaagaagaaagttgttgtaagacaggagaaacctttagttgctccacagtttagagcg
actgatacttcacaggttaaaaaggtatctgaactttttgaagataaagaattctgtgtg
gtcaatgggtcaagtaaacattccaaagccagcctcgagaagaagattgttgagtatggg
ggaactgcggttcaacatccaggtccagagacgttttgtgtgctatgtgacaaagtgcaa
atgaaagtgaaaaatatcatcagcaccaacaaacatgacgtagtgaagttggactggttg
gtgagatgcacagaggctaggagacttctgccttgggttccatctgatatgctgcatgcc
agaccagaaacagaagccttgtttaaacagaattatgatgattatggagacagttacaca
gaagataccaccatagaccagctcatggttgttttcaagaaagtgcaagaagagggtaaa
ttgaaaccagtgagcacagattttatagctgagatagaaaataaatattttgtggaaggt
tctacatatggtctgttcaggctatgcagggtgtacctagatgacaacacagtgattggt
gacaaaagcacccacataaaggactgtagcttggagctgaccagcttagaactgaggatg
tatggagctactctgtgtgaaatgttgaacgaggatgtcacccacgtagttttatgtgac
agagacctgggaaggattgacaaattcaggagtcttaatcgctccagatggcagaaattc
catattgttacacaagattgggttagtgactgtatagataatgggaagattcttggagaa
agaggatatgaaccagcatag

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