Lacimicrobium alkaliphilum: AT746_19345
Help
Entry
AT746_19345 CDS
T04189
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lal
Lacimicrobium alkaliphilum
Pathway
lal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT746_19345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lal03019
]
AT746_19345
03400 DNA repair and recombination proteins [BR:
lal03400
]
AT746_19345
Enzymes [BR:
lal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT746_19345
Messenger RNA biogenesis [BR:
lal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AT746_19345
DNA repair and recombination proteins [BR:
lal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AT746_19345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ALT00209
UniProt:
A0A0U3B541
LinkDB
All DBs
Position
complement(4323079..4324872)
Genome browser
AA seq
597 aa
AA seq
DB search
MAQPSALGILSDIFGYKAFRPGQEEVIQACLDGQDTLVLMPTGGGKSLCYQIPALLLPGL
TVVVSPLISLMKDQVDALMASGVQAACLTSALSPQKQSEVMSQVRDGQIKLLYVAPERLM
QPYFIQRLQDLSVSLFAVDEAHCVSHWGHDFRQDYMALGQLKHFFPGVPVMGLTATADAA
TRADILQQLDLKQPFVYQGSFDRPNIRYTQIQKYKPLDQLERYIREQEGSGIIYCNSRKK
VDDVSYKLANRGINCAGYHAGMEPEIREIIQRDFIADNIDVIVATVAFGMGINKPNVRFV
AHHDLPRTIESYYQETGRAGRDGSPAEALLLFDEKDVARIREWISMTENPQRQQVELQRF
AAMEAFAESQTCRRQVLLNYFGEYNATACGNCDICLDPPKRFDGTVAAQKVLSCIYRLEQ
SAASQYLIDVLRGKKLKRIIDAGHDQLSTYGIGKDEPDAWWHNLINQLIHQGLARVDITQ
NAVIKLNEAARSVLKGEMAVNLAVPRMSLNLGKKAKLDNRNYDRALFARLKKLRKSIAEE
DQVPPFVVFSDMTLSHMAEKLPTNSAQMLEVSGVGQTKLARYGEPFLNAIKEHLAGE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccctcagcgcttggcattctaagcgatatctttggctataaggctttccgg
ccaggacaagaggaagtcatacaggcctgtctggatggtcaggacaccctcgtgttgatg
cccaccggtggtggtaagtccctctgctatcagatacccgcactgctgctgccgggcctg
acagtagtggtgtcaccactgatatcactgatgaaagatcaggtggatgcccttatggcc
tcgggggtacaggcggcctgtctgacctcggctttatcaccccagaagcagtctgaagtg
atgtcacaggtcagagacggtcagattaagctgctctacgtggccccggaaagactgatg
cagccctattttattcagcgcctgcaggatttgtcggtaagcttgtttgccgtagacgaa
gctcactgcgtatcacactggggccatgattttcgccaggattatatggcccttggccag
cttaagcacttttttccgggcgtgccggtaatgggcctgaccgccaccgccgatgccgcc
acccgcgccgatattctgcaacaactggatctgaagcagccctttgtttaccagggcagt
tttgaccgccccaatatccgctatacccagatccagaaatacaaaccgctggaccagctg
gagcgctatatccgcgaacaggaaggcagcggcattatttactgtaacagccgcaagaaa
gtagatgatgtgagttataaactggctaaccgcggtatcaactgcgccggttaccatgcg
ggcatggagccggagattcgcgagattattcagcgcgattttattgccgataatattgat
gtgatcgtcgccaccgtggcatttggcatgggcattaataagcccaatgtgcgttttgtg
gcccaccacgatctgccccgtaccatcgaatcttattatcaggaaaccggccgcgccgga
cgagatggcagccctgccgaggcgctgctgctatttgatgagaaagatgtggcgcgcatt
cgtgagtggatcagcatgaccgaaaacccgcagcgccagcaagtagaattacagcgtttt
gcggccatggaggcctttgccgagtcccagacctgccgccgccaggtgctgttaaattac
tttggcgaatacaatgccaccgcctgtggtaactgcgatatctgcctggatccgcccaag
cgttttgacggtacggtggccgcgcaaaaagtgctgtcctgtatctatcggctggaacaa
tctgccgccagccagtatctgattgatgtactcagaggtaaaaagcttaaacgtattatt
gatgccggtcacgaccaactcagcacttacggcattggcaaagacgaaccggacgcctgg
tggcataacctgatcaaccagctgattcatcagggcctggcaagggtggatatcactcaa
aatgcggtgataaagctcaacgaagcggccagatcagtgcttaaaggtgaaatggcggtc
aatctggccgtacccagaatgagccttaacttgggtaaaaaagccaaactggataaccgt
aactacgaccgggccctgttcgccagactgaagaaactgcgtaaaagcattgcagaggaa
gatcaggtaccgccctttgtggtattcagcgatatgaccctgtctcatatggcagaaaaa
ctgcccaccaacagcgcacagatgctggaagtcagcggcgtcggccagaccaaactggcc
cgctacggcgaacctttcttaaacgccattaaggagcatctggccggagagtga
DBGET
integrated database retrieval system
