KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109363305Help
Entry
109363305         CDS       T04664                                 

Definition
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03030  DNA replication
lang03410  Base excision repair
lang03420  Nucleotide excision repair
lang03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109363305
   03410 Base excision repair
    109363305
   03420 Nucleotide excision repair
    109363305
   03430 Mismatch repair
    109363305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lang03032]
    109363305
   03400 DNA repair and recombination proteins [BR:lang03400]
    109363305
Enzymes [BR:lang01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109363305
    6.5.1.6  DNA ligase (ATP or NAD+)
     109363305
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     109363305
DNA replication proteins [BR:lang03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    109363305
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     109363305
DNA repair and recombination proteins [BR:lang03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109363305
   NER (nucleotide excision repair)
    Other NER factors
     109363305
   MMR (mismatch exicision repair)
    Other MMR factors
     109363305
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 109363305
NCBI-ProteinID: XP_019465069
LinkDB All DBs
Position
LG13
AA seq 730 aa AA seqDB search
MSKPPSAFDALMSAARAAAKKKPPHSTTSSPKKRKSPPPPTPAPASTLNPSSNPKTLDSQ
DSVKPEPPPKKLRNVSNSSSLEKNAELKKLAPLLKKKPSEFKPSSVATWEKGDPVPFLFL
SLAFDMISKESGRIVITDIVCNLLRTVIYTTPEDLIPVVYLSANRIAPAHEGLELGIGDA
SIIKGLAEACGRTEAQIKKQYKEKGDLGIVAQASRSSQSMMRKPDPLTIRKVFKTFHLIA
KESGKDSQEKKKNHIKALLVAATDCEPQYLIRLLQAKLRIGYAEQTLLAALGQAAVYTEE
HSTAPPEVQSPFEEASKIVKHVYSVLPDYDKIASALLAHGVWELPKTCTFTPGVPVGPML
SKATKGVSEVLNKFXDVEFTCEYKYDGERAQIHYMENGAVEVYSRNAEQNTGKFPDVVAA
VSRLKKSNVSSFVLDCELVAYDRAKKKILPFQVLSTRARKNVTMNDIKVDVCIFAFDLLY
LNGKALLQENLKIRREHLYASFEEESGFFQFATAIISNDVEEVQKFLDQAVDASCEGLII
KTLNDDATYEPSKRSLNWLKLKKDYMENIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD
NNNEEFQSICKIGTGFSEEMLEERSTSLRSKVIPKPKAYYRYAETINPDVWFETSEVWEV
KAADLTISPVYRAAVGIVDSNKGISLRFPRLIRVRPDKAPEEASSSEQVADMYNAQKHNH
VNNQDEDEDD
NT seq 2193 nt NT seq  +upstreamnt  +downstreamnt
atgtccaaaccaccctccgccttcgacgcccttatgtccgccgcacgcgccgccgcaaaa
aagaaacctcctcactcaacaacctcttcccctaagaaacgaaaatctccacctccccca
acccccgctcccgcttcaaccttgaaccctagcagcaaccctaaaacccttgattctcag
gactccgtgaaacctgaaccgccaccgaagaagcttcgcaatgtgtctaattcttcttcg
ctggagaagaacgctgaattgaagaaattagctccactgctgaagaagaaaccctccgag
ttcaaacctagctccgtagctacatgggagaagggtgatcccgttccgtttctgttcctt
tctctagcgtttgatatgatttcaaaagaatccggaaggattgttattactgatatagtg
tgcaatcttttgaggactgtgatatatactacacctgaggatttgatccctgttgtttat
ctttccgcgaatcggattgcgccggcgcatgaagggttagaattgggaattggagatgct
tccattatcaaggggctcgctgaggcatgtggaaggactgaagcacagattaagaagcag
tataaggaaaaaggtgatttaggaattgttgcccaagcaagccggtcttcccaatctatg
atgcggaaacctgatccattgacaattaggaaggttttcaaaaccttccatcttattgcc
aaggaatctggaaaagacagtcaagagaagaaaaagaatcatatcaaagcactccttgtt
gcagcaactgattgtgaacctcaatatctaatccgcttgttacaggctaagttgcgaatt
gggtatgctgagcaaactctcctagctgcattaggccaagctgcagtatacactgaagaa
cattctacagcacctcctgaagttcagtctcctttcgaagaggcttcaaagattgttaaa
cacgtttattctgttcttccggactatgacaaaatagcatctgcattgcttgcacatggt
gtatgggagcttccaaagacatgtacgtttactcctggcgttccagttggaccaatgctg
tcaaaagcaaccaaaggtgtatctgaagttctaaataaattttaggatgtggagtttacc
tgtgaatataaatatgatggagagcgtgcccagatacattacatggaaaatggcgccgtt
gaggtttacagtagaaatgcagaacagaacactgggaagtttcctgatgttgttgctgca
gtttcaaggttaaagaaatcaaatgtatcatcatttgttcttgattgtgagcttgttgca
tatgatcgtgctaagaagaaaatccttcctttccaggttcttagtacccgggctcgcaaa
aatgtcactatgaacgatataaaggttgatgtttgcatatttgcttttgatttgttatat
cttaatgggaaagcacttcttcaggaaaacctgaaaatccgtagagagcatctctatgcc
tcttttgaggaagaatctggattttttcagtttgcaacagcaataatatcaaatgatgtt
gaggaagtacagaaatttcttgaccaagctgttgatgcaagttgtgagggattaattatt
aaaacattaaatgatgatgctacatatgaaccttccaagcggtcactcaactggctaaaa
ctgaagaaagattatatggagaatataggggactcactagatttggtacctattgctgct
ttccatggtcgtgggaaacgtacaggagtctatggtgcctttctacttgcttgctatgac
aacaacaatgaagaattccaaagtatttgtaaaataggaacgggattctctgaagaaatg
ctcgaagaaagatctactagtcttcgttctaaagtgattcccaagccaaaggcatactat
agatatgcagagacaatcaaccctgatgtctggtttgaaaccagtgaggtgtgggaggtg
aaagctgcagacttgaccattagccctgtttaccgtgctgcagtgggcatagtagattca
aataagggcatttcacttcggttcccacgtttaattcgtgtgcgacctgacaaagctccg
gaagaggcctcatcatctgagcaggttgccgatatgtataatgcccaaaaacataatcat
gtgaacaaccaagatgaggatgaagatgattga

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