Lactobacillus apis: DKL56_05605
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Entry
DKL56_05605 CDS
T06844
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lapi
Lactobacillus apis
Pathway
lapi03030
DNA replication
lapi03430
Mismatch repair
lapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DKL56_05605
03430 Mismatch repair
DKL56_05605
03440 Homologous recombination
DKL56_05605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lapi03032
]
DKL56_05605
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_05605
Enzymes [BR:
lapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DKL56_05605
DNA replication proteins [BR:
lapi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DKL56_05605
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DKL56_05605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
RuvB_N
AAA_5
DNA_pol3_gamma3
TIP49
AAA_30
AAA_22
AAA_19
AAA_24
AAA_7
AAA_assoc_2
AAA_16
AAA_14
AAA_2
AAA_18
Sigma54_activat
Mg_chelatase
DUF5616
DUF815
Glyco_tranf_2_5
DUF5867
MbeD_MobD
Rep_fac_C
RNA_helicase
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
AWM74007
LinkDB
All DBs
Position
complement(1158674..1160497)
Genome browser
AA seq
607 aa
AA seq
DB search
MAYQALYRKWRPRTFDSVIGQEDITNTLKNAIKRGTISHAFLFAGPRGTGKTSCAKIFAK
ALNCTNLQDGEPCNECENCLAADKGAMADIMEIDAASNNGVDEIREIRDKVKYAPTQGKY
KVYIIDEVHMLSMGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRISQ
ADLEKRMKYILDQENIKYDDKALAVIAEVADGGMRDALSILDQLLSYENDSVEYDAALEI
TGFAAKEKIEQILLAILNKDASQALALAQTELQNGASSKNILDELIDMATNALILLKAGG
ENKSNFLSQDFVEQIKDIPEQRYFNLIASANTALNDLRYTNQQQIPLEVFLVESTNQEVV
PNAAATPATSPVVEKQAADGQELQAEVTALKKQVVELTEKVAKLGKTQNVNSDRIFHLDT
EISNVGKMSQPSEEVAKPKNHKKKVRNDQHADEQNRKQVYHVLENATKKDLQAIKDVWPD
LQSVLAVSQRALLDVLEPVAASPDQVVMKCKYALWFEKASSDDDLLDILTDQIAKFTKHE
YQIVLVPDKDWFTVRKEFLQSHRDELLKRQKQSGIEESGAEEPVQENNDEVVQKAKDLFG
DAVNIKD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcgttataccgcaaatggcgaccacgcacttttgacagtgttattggt
caagaagatattacgaatactttgaaaaatgcgattaagcgcggcacgatttcacatgct
tttttatttgcaggaccgcgcggtacaggtaagacttcgtgtgccaagatttttgccaag
gcactcaactgtactaaccttcaagatggcgaaccatgtaatgagtgcgagaactgtctt
gctgctgataagggtgcgatggctgatatcatggaaattgatgcggcctcgaataatggg
gtcgatgaaatccgtgaaatacgtgataaggttaaatacgctccaactcaggggaaatac
aaagtctacattatcgatgaggttcatatgctttcaatgggggcattcaatgctttattg
aagactttggaagagccacctgagcatgttgtctttattttagcgactactgaattacaa
aaagtcccagctacaattatttctagaacgcagcgctataactttaagcgaatttcgcaa
gctgaccttgaaaagaggatgaagtatatccttgatcaagaaaatatcaaatatgatgat
aaagcccttgctgtaatcgccgaagtagctgatggtgggatgagggatgctcttagtatc
cttgatcaattgctcagttatgaaaatgattcggttgagtatgatgcggcacttgaaatc
actggctttgctgccaaagaaaaaattgaacagattttattagcaattttaaataaagat
gcaagccaagctcttgctttagcccagacagaattgcagaatggtgcgagctcaaaaaat
atattagatgagttaattgatatggccacgaacgctttgattttgctaaaagctggtggt
gaaaataaaagtaactttttaagtcaggatttcgttgagcagattaaggatattcctgaa
caacgctactttaatttaattgcatctgccaacactgcgctaaatgatttgcggtatact
aatcagcagcaaattcccttagaggtcttcttggttgaaagtactaatcaggaagtagtg
ccaaacgctgcagccacgcccgctacttccccagtagtagaaaagcaggcagctgacggt
caagaactgcaagctgaagtaactgcgcttaaaaagcaagtggttgaattaactgaaaaa
gttgctaagcttggtaaaacgcaaaacgtaaacagcgaccgcattttccaccttgatact
gagatatcaaatgtaggaaaaatgtcccaaccttctgaagaagttgctaaacctaaaaat
cataaaaagaaggttcgcaacgatcaacatgcagacgagcagaatcgcaaacaggtctat
catgttttggaaaatgctactaaaaaagatctacaggcaatcaaagatgtatggccagat
ttgcaatctgttttagctgtttcgcagcgagcactgcttgatgtgcttgagcctgtggcg
gctagtccggatcaggtagtgatgaaatgcaaatatgcgctttggtttgaaaaagctagc
tctgatgatgatctgcttgatattttgactgatcagattgcgaaatttactaagcatgag
taccaaattgtgcttgttccggataaggactggttcacagttcggaaggaatttttacag
tcgcacagggatgaactacttaagcggcagaagcaatctggtattgaagagtcgggagca
gaagagccagtgcaagagaataacgatgaagttgttcaaaaagcgaaagacttatttggt
gacgctgttaatattaaggattaa
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