KEGG   Lysobacter antibioticus ATCC 29479: GLA29479_1410
Entry
GLA29479_1410     CDS       T04526                                 
Name
(GenBank) RNA modification enzyme, MiaB family protein
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
laq  Lysobacter antibioticus ATCC 29479
Brite
KEGG Orthology (KO) [BR:laq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:laq03009]
    GLA29479_1410
Enzymes [BR:laq01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     GLA29479_1410
Ribosome biogenesis [BR:laq03009]
 Prokaryotic type
  ribosomal protein modification factors
   GLA29479_1410
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 CLP1_P
Other DBs
NCBI-ProteinID: ALN62292
LinkDB
Position
complement(1496721..1498079)
AA seq 452 aa
MSSASVSPANPKVGFVSLGCPKALVDSERILTQLRVEGYDIVQTYDAADVVVVNTCGFID
SAVTESLDAIGEAIAENGKVIVTGCLGKRSELIREAHPGVLSISGPQDYGSVMSAVHAAL
PPKHDPFIDLVPRRDDGIGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEV
LREAEKLAMGGVKELLVISQDTSAYGVDVKYAEREWRGKSYQTRMKALCEGLSELGIWTR
LHYVYPYPHVDDIIPLMADGKLLPYLDIPFQHASPRVLKLMKRPGAVDKTLERIQRWRSI
APDIAIRSTFIVGFPGETEQEFEELLDFLDEAQLDRVGAFAYSPVDGAKANDLPDPVDED
VKQERLARFMERQAEISAAKLEAKVGSIQRCLVDAIDGDLAIARSMADAPEIDGLVQIQN
GLEAQLRVGQFVDVEIMGSDEHDLFGEAVEQD
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtcttccgccagcgtctcgccagccaatcccaaagtcggtttcgtcagtctcggttgc
cccaaggcgctggtcgattcggaacgcatcctcacccagttgcgggtcgagggttacgac
atcgtccagacctacgacgccgccgacgtggtggtggtcaacacctgcggcttcatcgac
tcggcggtgaccgaatcgctggacgcgatcggcgaggccatcgccgagaacggcaaggtc
atcgtcaccggctgcctcggcaagcgctcggagctgatccgcgaagcgcaccccggggtg
ctgtcgatcagcggcccgcaggactacggcagcgtgatgagcgcggtgcacgcggcgctg
ccgccgaagcacgacccgttcatcgacctggtgccgcgccgcgacgacggcatcggcgtc
aagctcacgcccaagcactacgcttatctgaagatttccgaaggctgcaatcaccgctgc
agcttctgcatcattccgtcgatgcgcggcgatctggtctcgcgtccggtcgacgaggtg
ttgcgcgaagccgaaaagttggcgatgggcggggtcaaggagctgctggtgatctcgcag
gacacctcggcctacggcgtcgacgtcaagtacgccgagcgcgaatggcgcggcaagtcc
taccagacccgcatgaaggcgctgtgcgaaggcctcagcgaactcggcatctggacgcgt
ttgcactacgtctatccgtacccgcacgtcgacgacatcatccccttgatggccgacgga
aaattgctgccgtacctcgatatcccgttccagcacgccagcccgcgcgtgctcaagctg
atgaagcgccccggcgcggtcgacaagaccctcgagcgcatccagcgctggcgctcgatc
gccccggacatcgccatccgcagcaccttcatcgtcggtttcccgggcgagactgagcag
gagttcgaggaactgctcgacttcctcgacgaggcccagctcgaccgcgtcggcgccttc
gcctattcgccggtcgacggcgccaaggccaacgatctgcccgacccggtcgacgaagac
gtcaagcaggagcgtctggcgcgtttcatggagcgccaggccgagatttccgcggccaag
ctcgaagccaaggtcggcagcatccagcgttgcctggtcgacgccatcgacggcgacctc
gccatcgcccgttcgatggccgatgcccccgagatcgacggcctggtgcagatccagaac
ggcctcgaagcgcaactgcgcgtcggccagttcgtcgacgtcgagatcatgggcagcgac
gaacacgacctgttcggcgaagccgtcgaacaggattga

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