Lysobacter antibioticus ATCC 29479: GLA29479_1410
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Entry
GLA29479_1410 CDS
T04526
Name
(GenBank) RNA modification enzyme, MiaB family protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
laq03009
]
GLA29479_1410
Enzymes [BR:
laq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GLA29479_1410
Ribosome biogenesis [BR:
laq03009
]
Prokaryotic type
ribosomal protein modification factors
GLA29479_1410
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALN62292
LinkDB
All DBs
Position
complement(1496721..1498079)
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AA seq
452 aa
AA seq
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MSSASVSPANPKVGFVSLGCPKALVDSERILTQLRVEGYDIVQTYDAADVVVVNTCGFID
SAVTESLDAIGEAIAENGKVIVTGCLGKRSELIREAHPGVLSISGPQDYGSVMSAVHAAL
PPKHDPFIDLVPRRDDGIGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEV
LREAEKLAMGGVKELLVISQDTSAYGVDVKYAEREWRGKSYQTRMKALCEGLSELGIWTR
LHYVYPYPHVDDIIPLMADGKLLPYLDIPFQHASPRVLKLMKRPGAVDKTLERIQRWRSI
APDIAIRSTFIVGFPGETEQEFEELLDFLDEAQLDRVGAFAYSPVDGAKANDLPDPVDED
VKQERLARFMERQAEISAAKLEAKVGSIQRCLVDAIDGDLAIARSMADAPEIDGLVQIQN
GLEAQLRVGQFVDVEIMGSDEHDLFGEAVEQD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgccagcgtctcgccagccaatcccaaagtcggtttcgtcagtctcggttgc
cccaaggcgctggtcgattcggaacgcatcctcacccagttgcgggtcgagggttacgac
atcgtccagacctacgacgccgccgacgtggtggtggtcaacacctgcggcttcatcgac
tcggcggtgaccgaatcgctggacgcgatcggcgaggccatcgccgagaacggcaaggtc
atcgtcaccggctgcctcggcaagcgctcggagctgatccgcgaagcgcaccccggggtg
ctgtcgatcagcggcccgcaggactacggcagcgtgatgagcgcggtgcacgcggcgctg
ccgccgaagcacgacccgttcatcgacctggtgccgcgccgcgacgacggcatcggcgtc
aagctcacgcccaagcactacgcttatctgaagatttccgaaggctgcaatcaccgctgc
agcttctgcatcattccgtcgatgcgcggcgatctggtctcgcgtccggtcgacgaggtg
ttgcgcgaagccgaaaagttggcgatgggcggggtcaaggagctgctggtgatctcgcag
gacacctcggcctacggcgtcgacgtcaagtacgccgagcgcgaatggcgcggcaagtcc
taccagacccgcatgaaggcgctgtgcgaaggcctcagcgaactcggcatctggacgcgt
ttgcactacgtctatccgtacccgcacgtcgacgacatcatccccttgatggccgacgga
aaattgctgccgtacctcgatatcccgttccagcacgccagcccgcgcgtgctcaagctg
atgaagcgccccggcgcggtcgacaagaccctcgagcgcatccagcgctggcgctcgatc
gccccggacatcgccatccgcagcaccttcatcgtcggtttcccgggcgagactgagcag
gagttcgaggaactgctcgacttcctcgacgaggcccagctcgaccgcgtcggcgccttc
gcctattcgccggtcgacggcgccaaggccaacgatctgcccgacccggtcgacgaagac
gtcaagcaggagcgtctggcgcgtttcatggagcgccaggccgagatttccgcggccaag
ctcgaagccaaggtcggcagcatccagcgttgcctggtcgacgccatcgacggcgacctc
gccatcgcccgttcgatggccgatgcccccgagatcgacggcctggtgcagatccagaac
ggcctcgaagcgcaactgcgcgtcggccagttcgtcgacgtcgagatcatgggcagcgac
gaacacgacctgttcggcgaagccgtcgaacaggattga
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