Lysobacter antibioticus ATCC 29479: GLA29479_5213
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Entry
GLA29479_5213 CDS
T04526
Name
(GenBank) outer membrane autotransporter barrel domain
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
laq
Lysobacter antibioticus ATCC 29479
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
laq02000
]
GLA29479_5213
Transporters [BR:
laq02000
]
Other transporters
Pores ion channels [TC:
1
]
GLA29479_5213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Motif
Other DBs
NCBI-ProteinID:
ALN66034
LinkDB
All DBs
Position
complement(5738398..5743020)
Genome browser
AA seq
1540 aa
AA seq
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MXXSSIGASSATPSNLVLEGSTLRYTGTSTSSDRGFTLAKSGAILGSGIEVTNAAANLTF
SGPVISSDGANFTKTGAGTLTLSNDSNNYQGITTISGGTLSVDTLTNGGLVSGIGAASSA
SANLVLNGGGLQYTGATTSINRGFTVGTGNGTVDVADVATTLTVSGTAVGPGGNLIKAGA
GTLVLSGTNTYNGSNTVTGGTLRAGSTQAFGAPDTGNEMTLANTAGVTLDLNNFNNTIGP
LFGGGANGGNVTLGSATVRIAGGNGNYSGAISGTGGVLRTNSGVQTFNGCNNTYTGATTL
QGAELSVNCLANGGLASGIGASTNASTNLVFSAGTLTYTGGTVATDRGFQLLSNNGTINV
ANAGTTLEFSGQVVGGGFLQKNGPGTLVISGTNNTYTGGNQILAGVLRAGATNAFGSSGP
MILNNTAGALLDLAGFNTTVSSLSGGGANGGNVNLGAGALTISDGASQVYAGAISGSGGL
IKSGAGTQTLSGCNSSYSGATTINAGVLEVSCLENGGVNSSIGASSSAAANLALNGGTLR
YIGTGGSSDRQFTLGTAGGTLDASGSGIIELTSIAPVTLAGANTARTLTLTGTNTGNNVL
SAQLNNNGSGLTSLTKTGTGTWRLTNNNSTYTGITTISGGVLSVDQLANGGVASSIGASS
SAASNLVIGNGSTLRYTGAGDSTNRLFTLAPGVTFIESSGTGPINFSNTGAVTLSGTNTA
RTIALGGTNNGANTMGGAIGDNGTGATTLAKNDSGTWILTGNNTFSGNTVINDGNLMVGN
GGTTGNVGTGNVIIDSPTSTLSLNRSDTFTLTGFLSGPGTLAQVGTGTTILDPAGLTGSS
VGAVTISAGTLENRDGLVTSTLDMTGTSTFAVTGNGAFTGPGQTPVAITGDAGNQTIRMS
SADVFDVQGDLGGGSDTFDLSGLMRFGTLSLGDGDDTLILRDGFEFSDGANVTGGAGSND
NLVIDNTAALVLANDGTTTGFERLTKQNTGTLTVVDDHSFTAGTDLAGGTLDVDGRLETP
TLSMAAGTVLNVDGTVEDAGGTATTLSGSAGVNTINVGTTGTLRADGDLGDGSDSVTVAG
LLDTGTGVLTLGGGDDTLTLRDGAALSGLGVSGGNGGDDQLVLDNALALSVDGGVVNDFE
RLLKQNTGTATLTGAHSFDTSVIVAAGALDVDGIVETPTIDLGDDTALNVDGLVQGVGGV
ATAISGSAGANTVSVGAGGTLLANGDLGAGNDVLDVAGTLDTAGGVFALGDGDDTLTIHE
NTNIIGTVSAGAGNDTFDTHIDTVADLGAVQGFETLSKTGTGVLNINGPMSSDFTTVNVA
EGTLNVAAGGSVVPAPGNPLATTVASGATLLVDGSYGCGAGSDTMTVAGTVAGTGTIDLC
GGDDRLVLQDGADLNNAINGGVGGNDTLVLDNTGPLIFDGGNTDGFELLQKTNTGTATVT
GSQSFVGGTTIDGGTLDVDGTLETPTVGLADGTTLNVDGTLQAVGGIVATVTGDGGVNSV
IVGAGGTLLASGDLGAGNDVLDVIGTLDTRRRRXXTHLIN
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
gtgnnnnngagcagcatcggtgcctcgtcggcgactccgtccaacctggtgctggaaggc
agcaccttgcgctatacgggcaccagcaccagcagcgaccgcggtttcaccttggccaaa
tccggcgcgattctcggcagcgggatcgaagtgaccaacgcagcggccaatctgactttc
agcgggccggtcatcagcagcgacggcgccaactttaccaagaccggcgccggcaccctg
accttaagcaacgacagcaacaactaccagggcatcaccacgatcagtggcggcacgctg
tccgtggacacgctgaccaacggcggcctggtcagcggcatcggcgcggcgagcagcgca
tcggccaacctggtgctcaacggcggcggcctgcagtacaccggcgcgaccaccagcatc
aatcgcggtttcaccgtgggcacgggcaacggcaccgtcgacgtcgctgacgtggccacc
accctgaccgtcagcggtacggcggtaggccccggcggtaacctgatcaaggcgggcgcc
ggcaccctcgtgctctccggcaccaatacctataacggcagcaacaccgttaccgggggg
actttgcgcgccggctcgacccaggccttcggcgcgcccgataccgggaacgaaatgact
ctggccaatacggcaggcgtcactttggatctgaacaacttcaataacacgatcgggccg
ctgtttggcggcggcgccaacggcggcaacgtaactctcggctcggcgacggtgcgcatc
gcagggggcaatggtaactactcgggtgcgatcagtggcacgggtggcgtcttgcgcacc
aactccggtgtccagaccttcaacggttgcaacaatacctatacgggcgccaccaccctg
cagggcgccgaactgtcggtcaactgcctggccaacggcgggctcgccagcggtattggc
gcatccaccaatgcctcgaccaatttggtcttcagcgccggcacactgacctataccggg
ggtaccgtcgccaccgatcgcggcttccagctgctttcgaacaatggcaccatcaatgtg
gccaatgccggcaccacgctggaattctcgggtcaggtcgtcggcgggggctttctgcaa
aagaacggccccggcaccttggtgatttcgggcaccaacaacacctacaccggcggcaac
cagattctcgctggggtattgcgcgcgggcgcgaccaatgcgtttggctcaagcggtccc
atgatattgaacaacacggcgggcgcgctcctggatttggccggtttcaatacgacagta
agttcgctgtccggtggtggcgccaacggtggcaacgtcaacctgggagcgggcgcattg
accatcagcgatggtgccagtcaggtttacgcaggcgccatcagtggcagcggcggcctg
atcaagagcggcgcgggcacgcagacgctgtcgggttgcaacagcagctacagcggcgcg
acgacgatcaacgccggagtgctcgaggtcagctgcctggagaatggcggcgtcaacagc
tcgatcggcgcctcgtcatccgctgccgctaacttggcgctcaacggcggcaccctgcgt
tacatcggcacgggcggcagctctgaccgtcagttcaccctcggcaccgccggcggtacg
ctcgatgcctccggcagcggcatcatcgaacttacttccatcgctccggtgaccctggcc
ggggccaacaccgcccgtacgctgaccttgacgggcaccaataccggcaacaacgttttg
tccgcgcaactgaataacaacggctcgggcctcacgtcgctgaccaagaccggcaccggc
acctggcgactgaccaacaacaacagcacgtacaccggtatcaccaccatcagcggtggc
gtactcagcgtggaccaactagcgaacggtggcgtggccagcagcatcggcgcttcgtcg
agcgccgcttccaacctggtgattggcaacggctcgaccttgcgctacaccggcgcgggc
gacagcaccaaccgcttgttcacgctcgcgcctggcgtcaccttcatcgaatcctccggc
acgggaccgatcaacttctccaacaccggcgcggtcacgctgtcgggcaccaatacggca
cgtaccatcgccctcggcggcacgaacaacggcgccaacacaatgggcggtgcgatcggc
gacaacggcaccggcgcgaccaccctggccaagaacgacagcggcacctggatcctgacc
ggaaacaacacgttcagcggtaacacggtcatcaacgacggcaatctgatggtgggcaac
ggcggcaccaccggcaatgtcggcaccggcaatgtgatcatcgactcgccgacttcgact
ctgtcgctcaatcgcagcgacaccttcactcttaccggcttcctgagcggccccggcacg
ttggcccaggttggcaccgggaccaccatattggacccggccggcctgaccggtagcagc
gtcggcgcggtcaccatcagcgcgggcacgctggagaatcgagacggcttggtcacgtcg
accctcgacatgaccgggacctcgacgttcgcggtgaccggaaacggtgcattcaccgga
ccgggccaaactccggtagcgatcaccggcgacgcgggcaaccaaaccatccggatgtcc
agcgccgatgtgttcgatgtccagggcgatctcggtggcggcagcgacaccttcgatctg
agcggcctgatgcgattcggtaccctgagcctgggcgacggcgacgacacgctgatcctg
cgcgatggcttcgagttcagcgacggcgccaatgtgaccggcggcgccggcagcaacgac
aacctggtgatcgacaataccgccgccctcgtgcttgcgaacgacggcacgacgactggc
ttcgagcgcctgaccaagcagaacactggcactctgaccgtggtcgacgaccacagcttt
accgccggcaccgaccttgccggcggcaccctggacgtggatggccggctggagacgccg
accctgtcgatggccgcaggcaccgtgctcaacgtggacggcaccgtcgaggacgccggc
ggcacggctacgacgctcagcggcagcgccggcgtcaatacgatcaacgtcggcaccacc
ggtaccttgcgtgcggacggcgacctcggcgacggcagcgatagcgtgaccgtggccggg
ctcctggacaccggcacgggcgtcctgaccttggggggcggcgacgacacgttgactttg
cgcgacggcgccgccctcagcggcctgggcgtgagcggcggcaacggcggcgacgatcaa
ttggtgttggacaacgccctggcgctgagcgtcgatggcggtgtcgtcaacgacttcgag
cgtctgctcaaacagaacaccggtactgccacactgaccggtgcgcatagtttcgacacc
agcgtcatcgtcgccgccggcgcgctggatgtcgacggcatcgtcgaaacgccgaccatc
gacctgggcgacgataccgcactgaacgtcgacggcctggtccaaggtgtcggcggcgtc
gccaccgcgatcagcggcagcgccggcgcgaatacggtcagcgtcggcgcgggcggcacg
ttgctggcgaatggcgacctcggcgccggcaacgatgtgttggatgtcgccggcacgctc
gataccgccggtggcgtgttcgctctgggcgacggcgacgacaccctgaccatccacgaa
aacacgaatatcatcggtaccgtctcggccggcgccggcaacgacaccttcgacacccac
atcgacacggtcgccgacctcggcgcggtgcagggcttcgagaccctgagcaagaccggc
acgggcgtgctcaacatcaacgggccgatgagctcggacttcaccacggtgaacgtggcc
gaaggcaccttgaacgtcgctgcgggcggcagcgtggttccggcaccgggcaatcccctc
gccaccaccgtggcgagcggggcgaccttgctcgtcgacggcagctacggctgcggcgcc
ggcagcgacacgatgacggtggccggcaccgtggcgggcaccggcaccatcgacctgtgc
ggcggcgacgaccgcctggtgctgcaggacggcgccgatctgaacaatgcgatcaacggc
ggcgtgggcggtaacgacaccctggtgctcgacaataccggcccgctcatcttcgacggc
ggcaacaccgacggtttcgagctgttgcagaaaaccaacaccggcacggcgacggtcacc
ggcagccagagcttcgtcggcggcacgacgatcgacggcggcacgctggacgtggacggc
acgctggagacgccgaccgtcggcctggccgacggcaccacgctcaacgtggacggcacg
ctgcaggccgtcggcggcatcgtggccacggtgaccggcgatggcggggtcaacagcgtc
atcgtcggcgcgggcggcacgctgctggcgagcggcgacctgggcgcgggcaacgacgtc
ctcgacgtgatcggcacgctcgacacccggcggcggcgtnnnnncacacacttaattaat
taa
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