Loxodonta africana (African savanna elephant): 100654811
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Entry
100654811 CDS
T04351
Gene name
TRPC1
Definition
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04360
Axon guidance
lav04724
Glutamatergic synapse
lav04726
Serotonergic synapse
lav04929
GnRH secretion
lav04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100654811 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
100654811 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
100654811 (TRPC1)
04726 Serotonergic synapse
100654811 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
100654811 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100654811 (TRPC1)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100654811 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
DUF2157
Motif
Other DBs
NCBI-GeneID:
100654811
NCBI-ProteinID:
XP_023411221
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MFVYCYLGDYYMVKKILEENCSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQY
SSPGHFALPHPRGCLELPGDIVRFHSYKSTDALLVAIDSEVVGAVDILLNHRPKRSSRPT
IVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAK
NKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFSNDYEEL
AQQCKTFAKDLLAQARNSRELEVILNHTSNDEPLDKRGLLEERMNLSRLKLAIKYNQKEF
VAQSNCQQFLNTVWFGQMSGYRRKPTCKKIVTVLTVGVFWPVLSLCYLIAPKSQFGRIIH
TPFTKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIFGMIWSDIKR
LWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFHDFADRKDWDAFHPTLVAEGL
FAFANVLSYLRLFFMYTTSSILGPLQISMGQMLHDFGKFLGMFLLVLFSFTIGLTQLYDK
GYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFV
GAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPP
FNIVPSPKTICYIVSSLRKWICSHTSKGRVKRQNSLKEWRNLKQKRDENYQKVMCCLVHR
YLTSMRQKMQSTDQATVESLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtatattgttatttaggtgactattatatggttaaaaagattttggaggaaaac
tgttcaggtgacttgaacataaattgcgtagatgtgcttgggagaaacgctgttaccata
actattgaaaacgaaaacttggatattctacagcttcttttggactacggttgtcagtac
tcctcacctgggcattttgccctgccccacccaaggggttgtttggaattgcctggagac
attgttcgttttcacagctacaagtccacagatgcacttttggtggcaatcgactctgaa
gtagtgggagctgttgatatactacttaatcatcggccaaaacgatcatcaagaccaact
atagtaaaactaatggaaagaattcagaatcctgaatattcaacaacgatggatgttgca
cctgtcattttagctgctcatcgtaacaactacgaaattcttacaatgctgttaaagcag
gatgtgtctctacccaagccccatgctgttggctgtgaatgcacgttgtgttctgcaaaa
aacaaaaaggacagcctccgacattccaggtttcgtcttgatatttatcgatgcttggcc
agtccggctctaataatgttaacagaggaggatccaattctgagagcatttgaacttagt
gcagatttaaaagaactaagcctcgtggaggtggaattcagcaatgattatgaggagcta
gctcagcaatgtaaaacgtttgctaaagatttgcttgcacaagcccggaattcccgcgaa
ttggaggtgatcctaaaccatacatctaatgatgagcctcttgacaaacggggattacta
gaagaaagaatgaatttaagtcgtcttaaacttgctataaaatataaccaaaaggagttt
gtcgcccagtctaactgccagcagtttctgaacaccgtttggtttggacaaatgtcaggt
taccgacgtaagcccacctgtaagaagatagtgactgttttgacagttggcgtcttttgg
cctgttttgtcactttgttatttgatagctcccaaatctcaatttggtagaatcattcac
acaccttttacgaagtttattattcacggagcatcatatttcacgttcctgctgttacta
aacctgtactctcttgtctacaatgaggataagaaaaacacaatggggccagcccttgaa
agaatagactatcttcttatactgtggatttttgggatgatttggtcagacattaaaaga
ctctggtatgaagggttggaagactttttagaagaatctcgtaatcaactcagttttgtc
atgaattccctttatttggcaacgtttgccctcaaagtggttgctcatagcaagtttcat
gactttgctgatcggaaggactgggatgcgttccatcccacactggtggccgaagggctt
tttgcatttgcaaacgttctgagttatcttcggctcttttttatgtatacgaccagctct
atcttgggtccattacagatttcaatgggacagatgttgcatgattttggaaaatttctt
gggatgttccttcttgtcttgttttctttcacaattggcctgacccagctgtatgataaa
ggctatactccaaaggagcagaaggactgcgtcggcatcttctgtgaacagcaaagcaat
gatacctttcactcgttcattggcacttgctttgccttgttctggtatattttctcccta
gcgcatgtggccatctttgtcacaaggttcagctatggagaagagctgcagtccttcgtt
ggagctgttatcgttggcacctacaacgtggtggttgtgatcgtgcttacgaagctgctg
gtggcgatgcttcacaaaagctttcagttgatagcaaatcatgaagacaaagaatggaag
tttgctcgagcaaagttgtggcttagctactttgatgacaaatgtaccttacccccgcct
ttcaacatcgttccttccccgaagactatctgctatatcgtgagtagcctcaggaagtgg
atttgttctcatacatcaaaaggcagggtcaaacggcaaaacagcttaaaggaatggaga
aatttgaaacaaaagagagatgaaaactaccaaaaagtgatgtgctgtttagtacatcgc
tacctgacttccatgagacagaagatgcaaagtacagatcaggcaactgtggaaagttta
aatgaactacgccaagatctgtcaaaattccgaaatgaaatacgggatttacttggcttt
cggacttcaaaatatgctatgttttatccaagaaattaa
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