Loxodonta africana (African savanna elephant): 100659456
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Entry
100659456 CDS
T04351
Gene name
CDH1
Definition
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04015
Rap1 signaling pathway
lav04371
Apelin signaling pathway
lav04390
Hippo signaling pathway
lav04514
Cell adhesion molecules
lav04520
Adherens junction
lav05100
Bacterial invasion of epithelial cells
lav05200
Pathways in cancer
lav05213
Endometrial cancer
lav05216
Thyroid cancer
lav05218
Melanoma
lav05219
Bladder cancer
lav05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100659456 (CDH1)
04390 Hippo signaling pathway
100659456 (CDH1)
04371 Apelin signaling pathway
100659456 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100659456 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100659456 (CDH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100659456 (CDH1)
09162 Cancer: specific types
05226 Gastric cancer
100659456 (CDH1)
05216 Thyroid cancer
100659456 (CDH1)
05218 Melanoma
100659456 (CDH1)
05219 Bladder cancer
100659456 (CDH1)
05213 Endometrial cancer
100659456 (CDH1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100659456 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100659456 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100659456 (CDH1)
04090 CD molecules [BR:
lav04090
]
100659456 (CDH1)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Centrosome formation and ciliogenesis proteins
Other centriole associated proteins
100659456 (CDH1)
Cell adhesion molecules [BR:
lav04515
]
Cadherins
Major cadherins
100659456 (CDH1)
CD molecules [BR:
lav04090
]
Proteins
100659456 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C
Cadherin_pro
RET_CLD1
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
100659456
NCBI-ProteinID:
XP_003417088
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MGPRCCSLFALLLLLQVSAWLCEEPEPCRPGFGAESYVFTVTRRHLERGHVLGRVSFEGC
TGRPRTAYFSEDTRFKVATDGVVTVRWPVQLHNPETSFLVHAWDSTRRKLSTKVTLKVTG
HHRHHQQHHDSLSGPQTEVLMFPDFHHGGLRRQKRDWVIPPISCPENEKGPFPKNLVRIK
SSRDKEIEVFYSITGEGADRPPVGVFVIERKTGWLKVTRPLDREQISNYTLLSHAVSSNG
DAVEDPMEIVITVTDQNDNKPVFTQAVFQGSVMEGAVPGTSVMQVTATDADDDVNTYNAA
IVYTIENQEPTLPHDNMFTINRDTGVISVVTSGLDRESVPKYTLVVKATDLQGLGLSTSA
TAMITVRDNNDNPPIFNPTMYEGTVPENKANADITRLKVTDADVPDTPAWKAKYNILNDN
EKQFVVITDPVTNEGILRTAKGLDFEAKQQYILYVTAENEVPFVVSLSTSTATVTVDVID
VNEAPIFMPPIKRVEVPEDFGVGQEITSYTAQDPDKFMQQKITYRIWRDTANWLEINPDT
GAISTRAELDREDLEHVKNSTYTALIIATDDGSLPATGTGTFILILSDVNDNAPIPDPRS
MDFCQVDPQPHTIYIIDPDLPPNTSPFTAELMYGASVNWSIEYKDAARESLLLMPKVRLE
LGDYKVHLKLTDNQNKDQVTTLDVFMCDCEGAVNTCKRHMPIANAGLPVSAVLGILGGIL
ALLILILLLLLFLRRRRVVKEPLLAPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDA
RPEVIRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGS
GSEAASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDD
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggccctcggtgctgcagcctcttcgcactcctgctgctgctacaggtttcggcgtgg
ctctgtgaggagccggagccctgccgtcctggctttggggcggagagctacgtgttcacg
gttacccggcggcacttggagagaggtcacgtcctgggcagagtgagctttgaaggatgc
actggtcgaccaaggacagcctatttttctgaagacacccgattcaaagtggccacagat
ggtgtggttacggtcagatggcctgtacaacttcataatccagagaccagctttcttgtc
catgcctgggactccacccgcagaaagctttccaccaaagtgacactgaaggtcactggg
caccaccgacaccaccaacagcatcatgactctctctctggaccccagacagaagtgctc
atgtttcccgacttccatcatgggggtctccgaagacagaagagagactgggttatccct
cctattagctgcccagaaaatgaaaaaggcccatttcctaaaaacctggttcggatcaaa
tctagcagggacaaagaaattgaggttttctacagcatcactggtgaaggagctgataga
cctcctgtcggtgtgttcgttattgaaagaaaaacaggatggctgaaggtgacgcggcct
ctggatagagaacaaatttccaattacactctcttgtctcatgctgtgtcatcaaatgga
gatgcagtcgaagacccaatggagattgtgattaccgtgacagatcagaacgacaataag
cccgtattcacccaggctgtctttcaagggtctgtcatggaaggcgctgtcccaggaacc
tcagtgatgcaggtcacagccacagacgcggatgacgatgtgaacacctacaatgctgcc
atcgtttataccattgaaaaccaggagcctaccttgcctcatgacaacatgttcaccatc
aaccgggacacaggagtcattagtgtggtcaccagtgggctggatcgagagagtgttccc
aagtataccctggtggttaaagctactgaccttcaaggtttgggcctgagtacatcagca
acagctatgattacagtcagggacaacaacgacaaccctcccatcttcaacccgacaatg
tacgaaggtacggttcctgagaataaggccaatgctgatatcaccaggctcaaagtgact
gatgctgatgtccctgacaccccagcgtggaaggccaagtacaacatattaaatgataat
gagaagcaatttgttgtcatcacagatccagtaacgaatgaaggcattctgagaacagct
aagggcttagattttgaggccaagcagcagtacattctatatgtgacagctgagaatgag
gtcccctttgtggtcagtctttccacctccacagccacagtgactgtggatgtgatagat
gtgaatgaagcccccatcttcatgcctcctatcaagagagtggaagtgcccgaagacttt
ggtgtgggccaggagatcacgtcctacactgcccaggatccagacaagtttatgcaacag
aagataacgtatcgaatttggagggatactgccaactggctggagattaatccggacact
ggggccatttccactcgggctgagttggacagagaggacttggagcatgtgaagaacagc
acatacacggccctcattattgctactgacgatggctctctacctgctactggtactgga
acctttattctgatcctctctgatgtgaatgacaatgcccccataccagaccctcgaagt
atggacttctgccaggtggacccacagcctcataccatatacatcattgatccagacctt
ccccccaatacttctcccttcacagcggaactaatgtatggggcaagtgtcaactggtcc
atcgagtacaaagatgcagcccgagagtctcttcttttgatgccaaaggttcgtttagag
ctgggtgactacaaagtacatctcaagctcacggataaccagaataaagaccaggtgacc
accttagatgtctttatgtgtgactgcgaaggggccgtcaacacctgtaagagacatatg
ccaattgctaacgcaggattgccagtttctgctgttttggggattctcggaggaatcctt
gctttgctaatcctgattctgctgctcctgctatttcttcggaggagaagagtggtcaaa
gagcccttactggcccctgaggatgacactcgggacaacgtttattactatgatgaagaa
ggaggtggagaagaggaccaggactttgacttgagccagttgcacaggggcctggatgct
cgacctgaagtgattcgcaatgatgtggcacctaccctcatgagtgtgccccagtatcgt
ccccgccccgccaatcctgatgaaattggaaattttattgatgaaaacctgaaggcggct
gatagcgaccccactgctcccccttatgactctctgcttgtgtttgactatgaaggaagc
ggttctgaagctgctagtctgagctctctgaactcctcagagtcagaccaagaccaggac
tatgactacttgaacgaatggggcaatcgcttcaagaagctggcagatatgtatggaggc
ggtgaggacgactag
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