Loxodonta africana (African savanna elephant): 100665802
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Entry
100665802 CDS
T04351
Gene name
DDB2
Definition
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03420
Nucleotide excision repair
lav04115
p53 signaling pathway
lav04120
Ubiquitin mediated proteolysis
lav05161
Hepatitis B
lav05169
Epstein-Barr virus infection
lav05200
Pathways in cancer
lav05202
Transcriptional misregulation in cancer
lav05210
Colorectal cancer
lav05212
Pancreatic cancer
lav05213
Endometrial cancer
lav05214
Glioma
lav05216
Thyroid cancer
lav05217
Basal cell carcinoma
lav05218
Melanoma
lav05220
Chronic myeloid leukemia
lav05222
Small cell lung cancer
lav05223
Non-small cell lung cancer
lav05224
Breast cancer
lav05225
Hepatocellular carcinoma
lav05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100665802 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
100665802 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100665802 (DDB2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100665802 (DDB2)
05202 Transcriptional misregulation in cancer
100665802 (DDB2)
09162 Cancer: specific types
05210 Colorectal cancer
100665802 (DDB2)
05212 Pancreatic cancer
100665802 (DDB2)
05225 Hepatocellular carcinoma
100665802 (DDB2)
05226 Gastric cancer
100665802 (DDB2)
05214 Glioma
100665802 (DDB2)
05216 Thyroid cancer
100665802 (DDB2)
05220 Chronic myeloid leukemia
100665802 (DDB2)
05217 Basal cell carcinoma
100665802 (DDB2)
05218 Melanoma
100665802 (DDB2)
05213 Endometrial cancer
100665802 (DDB2)
05224 Breast cancer
100665802 (DDB2)
05222 Small cell lung cancer
100665802 (DDB2)
05223 Non-small cell lung cancer
100665802 (DDB2)
09172 Infectious disease: viral
05161 Hepatitis B
100665802 (DDB2)
05169 Epstein-Barr virus infection
100665802 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100665802 (DDB2)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100665802 (DDB2)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
100665802 (DDB2)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100665802 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
100665802
NCBI-ProteinID:
XP_010590380
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MAPRKPPETKKTLEVPKCPKGKRSRSPQELEQEAKKLFVKGPGSSRRYDSGCLWAGLANL
QVLSPYTSIVRALHQHKLGKAAWPMLQQSLQQSFLHSLASYRIFHKAAPFDRRATSLAWH
PTHPSTLAVGSKGGDILLWNFNTKDKPTFIKGIGAGGSITGLKFNPLNTNQFFTSSMEGT
TRLQDFKGNTLRVFTSSGTCNLWFCSLDVSAGSRVVVTGDNAGQVVLLNMDGKELWNLRL
HKKKVTHVALNPCCDWLLATASVDQTVKIWDLRQVRGKSSFLSSLPHRHPVNAACFSPDG
ARLLTTDQNSEIRVYSASQWDCPLGLISHPHRHFQHLTPIKATWHPRYNLIVVGRYPDPN
FKSCTPHELRTIDVFDGSSGNMMCQLYDPEYSGIISLNEFNPVGDTLASVMGYHILIWSQ
EEAGLRKRETITKVCAKQGLGATNGNKSCEKRQLSVKGLKVYKS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaggaaacctccagaaaccaagaagacccttgaagttcctaagtgccccaag
ggcaagaggagcagaagtcctcaggagctggagcaagaggccaagaagctctttgtgaag
ggtcccggttctagcagaagatatgactcaggctgtctttgggcgggattggctaatctg
caggttctgtcgccatacaccagcatcgtcagggccctccaccagcataagctgggcaaa
gctgcctggccgatgctgcagcagagtctccagcagtcctttttgcactctctggcttct
taccggatattccacaaggccgccccctttgacaggagggccacatccttggcatggcat
ccaactcaccccagcaccctggctgtaggttccaaagggggagatatcttgctgtggaac
tttaatacaaaggacaaacccaccttcattaaagggattggagctggagggagcatcaca
gggctgaagtttaaccctctcaataccaaccagttttttacctcctcaatggagggaaca
actaggctgcaagactttaaaggcaacactctccgagtttttaccagctcaggcacctgc
aacctctggttctgcagcctggatgtgtctgccggaagccgagtggtggtcacaggagac
aacgcagggcaagtggtcctgctgaacatggacggcaaggagctttggaatctcagactg
cacaaaaagaaagtgacccatgtggccctgaacccatgctgtgattggctcctggccaca
gcctccgtagatcaaacagtgaaaatctgggacctgcgccaggttagagggaaatccagc
ttcctctcctcgctgccacacaggcatcctgtcaacgcagcttgtttcagtcctgatgga
gcccggctcctgaccactgaccagaacagcgagatccgggtttactctgcctcccagtgg
gactgccccctgggcctgatctcacaccctcaccgccacttccagcacctcacgcccatc
aaggcaacctggcatcctcggtacaacctcattgttgtgggccggtacccagatcctaat
ttcaaaagctgtactccccacgaattaaggacgatcgatgtgtttgatggaagctcaggg
aatatgatgtgtcagctctatgacccagaatattctggtatcatttcgctcaatgagttc
aatcccgtgggggacacgctggcctctgtgatgggttatcacattctcatttggagccag
gaggaagctgggttacggaagcgagagacaatcacaaaggtgtgtgccaagcaagggctt
ggagccacaaatgggaacaagtcctgtgagaagaggcagttatctgttaaagggctaaaa
gtatacaagtcttag
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