Loxodonta africana (African savanna elephant): 100667431
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Entry
100667431 CDS
T04351
Gene name
THBS1
Definition
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04015
Rap1 signaling pathway
lav04115
p53 signaling pathway
lav04145
Phagosome
lav04151
PI3K-Akt signaling pathway
lav04350
TGF-beta signaling pathway
lav04510
Focal adhesion
lav04512
ECM-receptor interaction
lav05144
Malaria
lav05165
Human papillomavirus infection
lav05205
Proteoglycans in cancer
lav05206
MicroRNAs in cancer
lav05219
Bladder cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100667431 (THBS1)
04350 TGF-beta signaling pathway
100667431 (THBS1)
04151 PI3K-Akt signaling pathway
100667431 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100667431 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100667431 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
100667431 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100667431 (THBS1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100667431 (THBS1)
05205 Proteoglycans in cancer
100667431 (THBS1)
09162 Cancer: specific types
05219 Bladder cancer
100667431 (THBS1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100667431 (THBS1)
09174 Infectious disease: parasitic
05144 Malaria
100667431 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100667431 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100667431 (THBS1)
04990 Domain-containing proteins not elsewhere classified [BR:
lav04990
]
100667431 (THBS1)
Membrane trafficking [BR:
lav04131
]
Endocytosis
Phagocytosis
Opsonins
100667431 (THBS1)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100667431 (THBS1)
Domain-containing proteins not elsewhere classified [BR:
lav04990
]
Thrombospondin domain-containing proteins
Thrombospondins
100667431 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
cEGF
EGF_3
TSP1_ADAMTS
EGF_CA
Laminin_G_3
TSP1_CCN
Laminin_G_2
EGF
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
100667431
NCBI-ProteinID:
XP_010596632
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MGLAWGLGVLLLLQVCGTNRIPESGGDNSVFDIFELTGGSRKGSGRRLVRGPDPSSSAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVV
SNGKAGTLDLSLTVQGKQHVVSVEDVLLATGQWKSITLFVQEDRAQLYIDCEKMENAELE
VPIQSIFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL
ALDNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSNMVLELRGLRTIVTTLQDSIRKV
TEENKELANELRRSPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSNA
TVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTR
TCHIQECDKRFKQDGSWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQLNGKPCEGEARET
KACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTENQIC
NKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPAGYSGNGVQCTDVDECKEVPDACFN
HNGEHRCKNTDPGYNCLPCPPRFTGTQPFGQGIEHATANKQVCKPRNPCTDGTHDCNKNA
KCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPNL
PNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNH
NPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHN
PDQLDSDSDRIGDTCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGVGDACDHDDDND
GIPDDRDNCRLVSNPDQKDSDGDGRGDACKDDFDQDSVPDIDDICPENVDISETDFRRFQ
MIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGYDEFNAVDFSGTFFINTERDDD
YAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNALW
HTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYDK
TYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggggctggcctggggacttggtgtcctgctcctcctgcaagtgtgtggcaccaaccgc
attccagagtctgggggagataacagcgtgtttgacatctttgaactcaccggaggttcc
cgcaagggctctgggcgccggctggtgaggggccctgacccctccagctcagctttccgc
attgaggatgccaatctgatcccccctgtgcccgatgacaagttccaggacctagtagat
gctgtgcgggcagagaaggggttcctcctcctggcctctctgcggcagatgaagaagacg
cggggcacgctgctggccctcgagcggaaagaccactctggccaggtcttcagcgtggtc
tccaatggcaaggcgggcaccctggacctgagcctgactgtgcaggggaagcagcatgtg
gtgtcagtggaagacgtgctcctggcaaccggccaatggaagagcatcaccctgttcgtg
caggaggacagggcccagctgtacatcgactgtgagaagatggagaacgctgagctagag
gtccccatccaaagcatcttcaccagggacctggccagcatcgccaggctccgcattgca
aagggaggcgtcaatgacaatttccagggggtgctgcagaatgtcaggtttgtctttgga
accacaccagaagacatcctcaggaacaaaggctgctccagctctaccaacgtccttctt
gctctcgacaatgtggtgaatggttccagccctgccatccgcaccaactacatcggccac
aaaacaaaggacctgcaggccatctgcggcatctcctgtgatgagctgtccaacatggtc
ctggaactcaggggcctgcgcaccatcgtcaccacgcttcaggacagcatccgcaaagtg
actgaagagaacaaggaattggccaacgagctgaggcggtctcctctctgctatcacaac
ggagttcagtacaggaataacgaagagtggactgtggacagctgcaccgaatgtcgctgt
cagaactcagtcaccatctgcaaaaaggtatcctgccccatcatgccctgttctaacgcc
acagttcctgacggagaatgctgcccacggtgttggcccagcgactctgcagatgatggc
tggtctccatggtctgagtggacctcctgctccgtgacctgtggcaatggaattcagcag
cgcggccgctcctgcgatagcctcaacaaccgatgcgagggctcctcagtccagacacgg
acctgccacattcaggagtgcgataaaagatttaaacaggatggcagctggagccactgg
tccccgtggtcatcttgctcggtgacatgtggtgatggtgtgatcacaaggatccggctc
tgcaactctcccagcccccagttgaacgggaagccatgtgaaggggaagctcgagagact
aaagcctgcaagaaagacgcctgcccaatcaatggaggctggggtccctggtcaccatgg
gacatctgttctgtcacctgtggaggaggggtgcagaaacgtagccggctctgcaacaac
cccacaccccaatttggaggcaaggactgcattggtgatgtgacggaaaaccagatctgc
aacaagcaggattgtccaattgatggatgtctgtccaatccctgctttgccggtgccaag
tgtactagctaccccgatggcagctggaaatgtggtgcttgccctgcgggttatagcgga
aatggcgtccagtgcacagatgttgatgagtgcaaagaagtgcccgatgcctgcttcaac
cacaatggagaacacaggtgtaagaacacagaccccggctacaactgtctgccctgccca
cctcgcttcactggcacgcagccctttggccagggcatcgaacacgccaccgccaacaaa
caggtgtgcaagccccgcaacccctgcacagacgggacacacgattgcaacaagaatgcc
aagtgcaactacctcggccattacagcgaccccatgtaccgctgcgagtgcaagcctggc
tatgcaggcaacggcatcatctgcggagaggacacagacctcgacggctggcccaatgag
gacctggtctgtgtggccaatgcaacttaccactgcaaaaaggacaactgtcccaacctt
cccaactcagggcaggaagactatgacaaggatggaatcggcgatgcctgtgacgatgac
gatgacaatgataaaattccagacgatcgggacaactgtccattccattacaacccagcc
cagtatgactatgacagagatgatgtgggcgaccgctgtgataactgtccctacaaccac
aacccagatcaggctgacacagacaacaatggggaaggagacgcctgtgcggctgacatt
gatggggatggtatcctcaatgaaagagacaactgccagtacgtgtacaatgtcgaccag
cgggatacggatatggatggggttggagatcagtgtgataactgccccctggaacacaat
ccagatcagctggactctgactcggaccgcattggagatacctgtgacagcaatcaggat
attgatgaagatggccaccagaacaacctagacaactgcccctatgtgcccaacgccaac
caggccgaccacgacaaggatggcgtgggagatgcctgtgaccatgatgatgacaatgat
ggcattcctgatgacagggacaactgcagactggtgtccaatcctgaccagaaggactct
gacggtgatggtcgaggtgatgcttgcaaggatgattttgaccaggacagtgtgccagac
atcgatgacatctgtcctgagaatgttgacatcagtgagactgatttccgccgattccag
atgattcctttagatcccaaaggaacatcccaaaatgatcctaactgggttgtacgccat
cagggtaaagagcttgtccagactgtcaactgtgaccctgggcttgctataggttatgat
gaatttaatgctgtggacttcagtggcacattcttcatcaacaccgagagggatgatgac
tatgccggatttgtgtttggctaccagtccagcagccgcttctatgttgtgatgtggaag
caggtcacccagtcctactgggacaccaaccccacaagggctcaggggtactcaggcctt
tctgtgaaagttgtgaactccaccacaggacctggcgagcacctgcggaatgctctgtgg
catacaggaaacacccctggccaggtgcgaaccctgtggcatgaccctcgtcatataggc
tggaaagatttcactgcctacagatggcgtctcagccaccggccaaagacaggcttcatt
agagtggtgatgtatgaagggaagaagatcatggctgactcgggacctatctatgacaag
acctacgctggtggcaggctagggttgtttgtcttctctcaagaaatggtgttcttctcc
gacctgaaatacgagtgcagagattcctaa
DBGET
integrated database retrieval system
