Loxodonta africana (African savanna elephant): 100668802
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Entry
100668802 CDS
T04351
Symbol
SMO
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04340
Hedgehog signaling pathway
lav04360
Axon guidance
lav05200
Pathways in cancer
lav05205
Proteoglycans in cancer
lav05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100668802 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100668802 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100668802 (SMO)
05205 Proteoglycans in cancer
100668802 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
100668802 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lav04030
]
100668802 (SMO)
G protein-coupled receptors [BR:
lav04030
]
Frizzled / Smoothened family
100668802 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
7tm_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
100668802
NCBI-ProteinID:
XP_003407319
UniProt:
G3TB43
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MAATRPARGPALPLLGLLLLLLGGRGRGAAGSGNATGSGPRGAGGSARRSAAATGPPRLL
SHCGRAAPCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLLLWSGLRNAPRCWAV
IQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPEGCPNE
VQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEDEHQDMHVYIAGFGAVT
GLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTM
RLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFH
LLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIR
GVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWE
RSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKAT
LLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVA
GLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEQANLWLVEAEI
SPELEKRMGRKKKRRKRKKEVCPLGPPTELPRPTVGHASSAVPRLPQLPRQKCLVAAGAW
GAGEPCRQGAWTLVSNPFCPEPSAFQDPFLPIAPAPVPWAQGRRQGLGPIHSRTNLMEAE
LMDADSDF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccgctacccggcccgcgcgggggccagcgctcccgctcctggggctgctgctgctg
ctgctggggggccggggccggggggcggccgggagcgggaatgcgaccgggtctgggccg
cggggcgctggcgggagcgcgaggaggagcgcagccgccactggccctccgcggctgctg
agccactgcggccgggcggccccctgcgagccgctgcgctacaacgtgtgtctgggctcg
gcgctgccctacggggcaacctccacgctgctggccggggactcggactcccaggaggaa
gcgcacggcaaactcctgctctggtcgggcctccggaacgcccctcgctgctgggcagtg
atccagcccctgctatgtgctgtgtacatgcccaagtgcgagaatgaccgagtggagctg
cccagccgcaccctctgccaggccacccgcggcccctgtgccatcgtggagagggagcgg
ggctggcccgacttcctgcgctgcacccccgatcacttccccgaaggctgtccgaatgag
gtgcagaacatcaaattcaacagttcgggccagtgtgaggctccgctggttcggacggac
aaccccaagagctggtacgaggacgtggagggctgcgggatccagtgccagaacccgctc
ttcacggaggacgagcaccaggacatgcatgtctacatcgctggcttcggcgccgtcaca
ggcctctgcacgctcttcacgctggccacgtttgttgctgactggcggaattcgaatcgc
taccctgcagtcattctcttctacgttaatgcgtgtttcttcgtgggcagcattggctgg
ctggcccagttcatggacggtgcccgccgggagattgtctgccgggcagatggcaccatg
aggcttggggaacccacctccaatgagaccctgtcctgcgtcatcatctttgtcattgtc
tattatgccctgatggctggcgtggtctggtttgtggtcctcacctatgcctggcacacc
tccttcaaagccctaggcaccacctaccagcctctttcaggcaagacctcctacttccac
ctgctcacatggtcactcccgtttgtgctcactgtggccatccttgctgtggcccaggtg
gatggggactccgtgagcggcatctgttttgtgggctacaagaactaccgataccgcgct
ggctttgtgctggcccccattggcctggtgctcattgtcggaggctacttcctcatccga
ggagtgatgactctgttctccatcaagagcaaccaccctgggctgctgagcgagaaggct
gccagcaagatcaacgagaccatgctgcgcctgggcatttttggcttcctggcctttggc
tttgtgctcatcaccttcagctgccatttctacgacttcttcaaccaggcggaatgggag
cgcagcttccgggactatgtgctatgccaggccaacgtgaccattgggctgcccaccaag
aagcccatcccagactgtgagatcaaaaaccgcccgagcctcctggtggagaagatcaat
ctgtttgccatgtttggcactggcattgccatgagcacctgggtgtggaccaaggccacg
ctgctcatttggaggcgcacctggtgcaggctgaccgggcagagcgatgacgagcccaaa
cggatcaagaagagcaagatgatcgccaaggccttctccaagcggcgagagctgctgcag
aaccccggccaggagctctccttcagcatgcacaccgtctcccacgacgggcctgtggcg
ggcttggcctttgacctcaatgaaccctcagcagatgtttcctctgcctgggctcagcat
gtcaccaagatggtggctcggagaggagccatactgccccaggatgtgtctgtcacccct
gtggcaactccagtgccccctgaggagcaagccaacctgtggctagtggaggccgagatc
tccccagagctggagaagcgcatgggccggaagaagaaacggagaaagaggaagaaagag
gtgtgcccactggggccccccaccgagctgccccgccccacggtgggccatgcctccagt
gctgtccctcggctgcctcagctgccccggcagaaatgcctggtggctgctggagcctgg
ggagctggggagccctgccgacagggagcctggaccctggtctccaaccccttctgtcca
gagcccagtgccttccaggacccgtttctgcccattgccccagcccccgtgccttgggct
cagggccgccggcagggtctggggcccattcactcccgcaccaacctgatggaggctgag
ctcatggatgcagactcagacttctga
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