Loxodonta africana (African savanna elephant): 100671471
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Entry
100671471 CDS
T04351
Gene name
TRAF6
Definition
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04010
MAPK signaling pathway
lav04064
NF-kappa B signaling pathway
lav04120
Ubiquitin mediated proteolysis
lav04140
Autophagy - animal
lav04144
Endocytosis
lav04380
Osteoclast differentiation
lav04620
Toll-like receptor signaling pathway
lav04621
NOD-like receptor signaling pathway
lav04622
RIG-I-like receptor signaling pathway
lav04657
IL-17 signaling pathway
lav04722
Neurotrophin signaling pathway
lav05132
Salmonella infection
lav05133
Pertussis
lav05135
Yersinia infection
lav05140
Leishmaniasis
lav05142
Chagas disease
lav05145
Toxoplasmosis
lav05152
Tuberculosis
lav05160
Hepatitis C
lav05161
Hepatitis B
lav05162
Measles
lav05168
Herpes simplex virus 1 infection
lav05169
Epstein-Barr virus infection
lav05170
Human immunodeficiency virus 1 infection
lav05171
Coronavirus disease - COVID-19
lav05200
Pathways in cancer
lav05222
Small cell lung cancer
lav05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100671471 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100671471 (TRAF6)
04064 NF-kappa B signaling pathway
100671471 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100671471 (TRAF6)
04140 Autophagy - animal
100671471 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100671471 (TRAF6)
04621 NOD-like receptor signaling pathway
100671471 (TRAF6)
04622 RIG-I-like receptor signaling pathway
100671471 (TRAF6)
04657 IL-17 signaling pathway
100671471 (TRAF6)
09156 Nervous system
04722 Neurotrophin signaling pathway
100671471 (TRAF6)
09158 Development and regeneration
04380 Osteoclast differentiation
100671471 (TRAF6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100671471 (TRAF6)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100671471 (TRAF6)
09162 Cancer: specific types
05222 Small cell lung cancer
100671471 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
100671471 (TRAF6)
05135 Yersinia infection
100671471 (TRAF6)
05133 Pertussis
100671471 (TRAF6)
05152 Tuberculosis
100671471 (TRAF6)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100671471 (TRAF6)
05161 Hepatitis B
100671471 (TRAF6)
05160 Hepatitis C
100671471 (TRAF6)
05171 Coronavirus disease - COVID-19
100671471 (TRAF6)
05162 Measles
100671471 (TRAF6)
05168 Herpes simplex virus 1 infection
100671471 (TRAF6)
05169 Epstein-Barr virus infection
100671471 (TRAF6)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100671471 (TRAF6)
05140 Leishmaniasis
100671471 (TRAF6)
05142 Chagas disease
100671471 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100671471 (TRAF6)
04121 Ubiquitin system [BR:
lav04121
]
100671471 (TRAF6)
Enzymes [BR:
lav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100671471 (TRAF6)
Membrane trafficking [BR:
lav04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100671471 (TRAF6)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100671471 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
Tropomyosin_1
U-box
SlyX
zf-RING_11
zf-TRAF
DUF3450
DUF16
ATG16
Tropomyosin
PspA_IM30
Spc29
CENP-F_leu_zip
AAA_13
Motif
Other DBs
NCBI-GeneID:
100671471
NCBI-ProteinID:
XP_023406685
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MSLLNCENSCGSSQPDGDCCAAMASSCSATTKDDSVSGTASTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLKVKCPNAGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKCHLNIHVLK
ECPRRQVSCVNCAILMAFEDKEIHDQNCPLANVICEYCNTMLIREQVMQRNHLARHLQEN
TQSHMRMLAQAVQNLSLALTPRPQCDMLPYDSASLSRVSSGCHPEVQNFQETIQQLEGRL
VRQDHQIRELTAKMETQSMYVGELKRTIRTLEDRIAEIEAQECNGIYIWKIGNFGMHLKC
QEEEKPVVIHSPGFYTGKPGYKMCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPF
QGTIRLAILDQSETPVRQNHEEIMDTKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRT
FVKDDTLLVRCEVYSRFDMGSLRREAFQPRSTDAGV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaactgtgaaaacagctgtggatccagccagcctgacggtgactgttgt
gctgccatggccagctcctgtagtgccacaaccaaagatgacagtgtgagtgggacagcc
agcacagggaacctctccagttcctttatggaagagatccaggggtatgatgtggagttt
gacccacccctggaaagcaagtatgaatgccccatctgtctgatggcattgcgggaagca
gtgcaaacaccatgtggccacagattctgcaaagcctgcatcaccaaatcgataagggat
gcaggtcacaaatgtccagttgacaatgaaatactgctggagaatcagctatttcctgat
aattttgcaaaacgagagattctttctctgaaggtgaagtgtccaaatgcaggttgtttg
cacaagatggagctgaggcatctagaggatcatcaagcacattgtgagtttgctcttatg
gattgtccccaatgccaacgtcccttccaaaaatgccatcttaatattcacgttctcaag
gagtgtccaaggaggcaggtttcctgtgtgaactgtgctatattaatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatacc
atgctcatcagagaacaggtaatgcagaggaatcacttggcacgccacctgcaagagaac
acccagtcgcacatgagaatgttggcccaggcggttcagaatttaagccttgctttaact
cccaggcctcagtgtgacatgcttccgtatgattctgcctctctgtcccgagtgtcctcc
ggatgtcacccagaggtccagaacttccaagaaaccattcagcagttagaaggtcgcctc
gtcagacaagaccatcaaatccgggagctgactgctaaaatggaaactcagagcatgtac
gtaggtgagctcaaacgaaccattcgaacccttgaggacagaattgctgaaatagaagca
caggagtgcaatgggatttacatctggaagattggcaactttgggatgcacttgaaatgc
caagaagaggagaaacccgttgtcattcacagccccggattctacactggcaaacccggc
tataagatgtgcttgcgcctgcacattcagctgccaaacgcccagcgctgtgcaaactac
atctccctctttgtccacacaatgcaaggagagtatgacagccacctgccctggcccttc
cagggtacaatacgccttgcaattctagatcagtccgaaacacctgtaaggcaaaaccac
gaagagatcatggataccaaaccagagctgcttgccttccagcgacccacaatcccacgg
aacccaaaggggtttggctatgtaacttttatgcacctagaagcgctaagacaaagaacc
ttcgttaaggatgataccttactagtgcgctgtgaggtctatagccgcttcgacatgggt
agccttcggagggaggcctttcagccacgaagtactgatgcaggggtatag
DBGET
integrated database retrieval system
