Loxodonta africana (African savanna elephant): 100672494
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Entry
100672494 CDS
T04351
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100672494 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100672494 (SCN9A)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100672494 (SCN9A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Lustrin_cystein
DUF6739
Motif
Other DBs
NCBI-GeneID:
100672494
NCBI-ProteinID:
XP_003405862
LinkDB
All DBs
Position
Unknown
AA seq
1974 aa
AA seq
DB search
MAMLPPPGPQSFVHFTEQSLALIEQRIAEGKTKDPKEEKKDDEDEGPKPSSDLEAGKPLP
FIYGDIPPGMVSEPLEDLDPFYADKKTFIVLNKGKTIFRFNATPALYILSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTLSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCFRNLLENNETYESILNTLETEEDYR
KYFYYLEGSKDALLCGFSGDSGQCPEGYVCMKGGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKE
LEFQQMLERLKKEQEEAEAVAAAAAEYTSIGRSRIMGLSESSSETSKLSSKSAKERRNRR
KKKNQKKLSRGEEKRDDEKLSKSESEESIRRKSVHLGVEGPRRARENRLSTPNQSPLSIR
GSLFFPRRSSRTSLFSFKGRGKDIGSETDFADDEHSIFGDNESRRGSLFVPHRPRERRSS
NISQTSRSPSILRVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEGTTNQIRKKRRSS
SYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTFLIWNCSPYWI
KFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTNEFKNMLTVGNLVFTGIFAAEM
VLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPT
LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISSDCTLPRWHMN
DFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVYMMVMVIGNLVVLNLFLALLLSSF
SSDNLTAIEEDTDANNLQIAVARIKKGINYMKQTLREFILKAFSKKPKISKDIRQTEDIN
GKKENYISNRTLAEMSKDLNFHKDKDKTSGFGSNMDKYRMEESDCQSFIHNPSLTVTVPI
APGESDLENMNTEELSSDSDTEYSKGRSNPWSSSECSTVDNPVPGEGEEAEAEPINPDEP
EACFTDGCVQRFPCCQVNIESGKGKIWWNIRKTCYKIVEHNWFESFIVLMILLSSGALAF
EDIYIERKKTIKIILEYADKIFTYVFILEMLLKWVAYGYKTYFTNAWCWLDFLIVDVSLV
TLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMKVVVNALIGAIPSIMNVLLVCLIF
WLIFSIMGVNLFAGKFYECVNTTDGSRLLPSQVQNRSECFALMNVSQNVRWKNLKVNFDN
VGLGYLSLLQVATFKGWMDIMYAAVDSVNVDKQPKYEYSLYMYIYFVIFIIFGSFFTLNL
FIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDL
VTNQAFDITIMVLICLNMVTMMVEKEGQSEYMDYILYWINVVFIILFTGECVLKLISLRH
YYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIR
TLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFETFGNSMICL
FQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGSPSVGIFYFVSYIIISFLVV
VNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSKLSDFAAALDP
PLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLRSQMEERFMSAN
PSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDKDDDLPNKGD
MVFDNDSSLEKTDVTPSTISPPSYDSVTKPDKEKYEKDKTEKEHQGKDGKESKK
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgccaccccccggaccacagagctttgtccacttcacagagcagtctctt
gctctcattgaacaacgcattgctgaaggaaaaacaaaggaccccaaagaagaaaagaag
gacgatgaggatgaaggcccaaagccaagcagtgacttggaagctggcaaaccactgccc
ttcatctatggagacattcctccagggatggtgtcggagcccctggaggacctggacccg
ttctatgcagacaaaaaaactttcatagtattgaacaaaggaaaaacaatcttccgtttc
aatgccacacctgctttgtacattttatctccattcagtcctctaagaagaatatctatt
aagattttagtacactccttattcagcatgcttatcatgtgcactattctgacaaactgc
atatttatgaccctgagtaaccctcctgattggaccaagaatgtagagtacacttttact
ggaatatatacttttgaatcacttgtaaaaatccttgcaagaggcttctgtgtgggagaa
ttcaccttccttcgtgacccgtggaactggctcgattttgttgtcattgtttttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtattgaga
gctttgaaaactatttctgtaattccaggcttgaagaccattgtgggggccctgatccag
tcagtgaagaagctctcagatgtcatgatcctgactgtgttctgtctgagtgtgtttgcg
ctaattgggctgcagctgttcatgggcaacctgaggaataaatgttttcgaaatctacta
gaaaataatgaaacatatgaaagcatattgaacaccttggagactgaagaagactataga
aaatatttttattacttggaaggatccaaagatgctctcctttgtggtttcagtggagat
tcaggtcagtgtccagaagggtacgtctgtatgaaaggtggcagaaaccccgattatggc
tacacaagctttgacactttcagttgggccttcttagccttatttcggttaatgacccaa
gattactgggaaaacctttaccaacagacactgcgtgctgctgggaaaacctacatgatc
ttctttgttgtggtgattttcctgggctccttttatctcataaacttgatcctggctgtg
gttgccatggcctatgaagaacagaaccaagcaaacattgaagaagctaggcagaaagag
ttagaatttcaacagatgttagaacgacttaaaaaagagcaagaagaagctgaggcagta
gcagcggcagcagctgaatatacaagtatcgggaggagcagaatcatgggcctctcagag
agctcttctgaaacgtccaaactgagctctaagagtgctaaagaaagaagaaacaggaga
aagaaaaagaatcaaaagaagctgtccagaggggaagaaaagagagatgatgaaaaattg
tccaaatctgaatccgaagaaagcatcaggagaaaaagtgtccaccttggtgttgaagga
cctaggcgagcacgtgaaaacagattatctacccccaatcagtcaccactcagcattcgt
ggctccttgttttttccaagacgcagcagcagaacaagtctttttagtttcaagggtcga
ggaaaagatataggatctgagactgactttgccgacgacgagcacagcatttttggagac
aatgaaagccgaaggggctcgctgttcgtgccccacagaccaagggagcggcgcagcagt
aacatcagtcaaaccagtaggtccccgtcaatactgcgggtgaacgggaagatgcacagc
gccgtggactgcaatggtgtggtctccctggttgatggaccttcagccctcatgcttccc
aatggacagcttctgccagagggtacaaccaatcaaatacgtaagaaaagacgatccagt
tcttatctcctttctgaggatatgctgaatgaccctaatctcagacaaagagcaatgagt
agagcgagcatattgacgaacactgtggaagaacttgaagagtctagacaaaaatgccca
ccttggtggtacagatttgcacacactttcttgatctggaattgttctccatattggata
aaatttaagaagttgatctattttatcgtaatggatccttttgtagaccttgctataacc
atttgcatagttttgaacacgttatttatggctatggagcatcaccccatgactaatgaa
ttcaaaaacatgctcactgtgggaaatttggtctttactgggatctttgcagctgaaatg
gttttaaaactaattgccatggacccatatgaatatttccaagtaggctggaatattttt
gacagccttattgtgactttaagcttagtggagcttttcttagcagatgtggaaggattg
tcagttctgcgatcattcagattgctccgggttttcaagttggcaaaatcctggccaaca
ttgaacatgctgataaagatcattggtaactcagtgggggccctgggtaacctcaccttg
gtgttggccatcatcgtcttcatttttgccgtggtcggcatgcagctctttggtaagagc
tacaaagaatgtgtctgcaagatctccagtgactgtacgctcccacgctggcacatgaat
gacttcttccactccttcctgattgtgttccgtgtgctgtgtggggagtggatagagacc
atgtgggactgtatggaggtcgctggccaaaccatgtgcctcattgtttacatgatggtg
atggtgattggaaacctagtggtcctgaacctatttctggctttattattgagctcattt
agctcagacaatcttacagcaattgaggaagacacagatgcaaacaacctccagattgca
gtggccaggattaagaagggaataaattatatgaaacaaaccttacgtgagtttattcta
aaagcgttttccaaaaagccaaagatctccaaggacataagacaaacagaagatataaat
ggtaaaaaagaaaactacatttctaatcgcacacttgctgagatgagcaaagatctcaat
ttccacaaagataaagataagaccagtggttttggaagcaacatggacaaataccggatg
gaagaaagtgactgtcaatcatttatccataaccccagcctcacagtgacagtgccaatt
gcaccgggggagtctgatttggaaaatatgaataccgaagaacttagcagtgattcagat
actgaatacagcaaagggagatcgaacccatggagttcttctgaatgcagcacagttgat
aacccagtgccgggagaaggagaagaagcagaggctgaacccataaatccagatgagcca
gaggcctgtttcacagatggttgtgtacagaggttcccatgctgccaagttaacatagag
tcagggaaagggaaaatctggtggaacataaggaaaacctgctacaagatagttgaacac
aactggtttgaaagcttcattgttctcatgatcctgctcagcagtggtgctctggccttt
gaagatatatatattgaaaggaaaaagaccattaaaattattctggagtatgctgacaag
atattcacttatgtcttcattctggaaatgcttctaaaatgggtagcatatggttacaaa
acttatttcaccaatgcctggtgttggctggatttcttaattgtcgatgtttctttggtt
actttagtagcaaacactcttggctactcagatcttggtcccattaaatccctccggaca
ctgagggccttaagacccttaagagccttatccagatttgaaggaatgaaggtggttgtg
aatgcactcattggagcaattccttccatcatgaatgtgctacttgtgtgtcttatattc
tggctaatatttagcatcatgggagtaaatttgtttgctggcaagttctatgagtgtgtg
aacaccacagatgggtcacggcttcttccaagtcaagttcaaaatcgttccgagtgtttt
gcccttatgaacgtgagtcaaaatgtgcgatggaagaacctgaaagtgaactttgataac
gttggactgggttacctgtctctgctgcaagttgcaacatttaagggatggatggatatc
atgtacgcagccgttgattctgttaatgtagacaagcagcccaagtatgaatacagcctc
tacatgtacatttactttgtcatctttatcatctttgggtcattcttcactttgaacctg
ttcattggcgtcatcatagataatttcaaccaacagaaaaagaagcttggaggtcaagac
atatttatgacagaagaacagaagaaatactataatgcaatgaaaaagcttggatccaag
aaaccacaaaagccaattcctcggccagggaacaaattccaaggatgtatatttgaccta
gtaacaaaccaagctttcgatatcaccatcatggttcttatctgcctgaacatggtaacc
atgatggtagaaaaagagggccagagtgaatatatggattacattttatactggataaat
gtggtttttattatccttttcactggagaatgtgtgctgaaactgatctccctcagacac
tattacttcactgtaggatggaacatttttgattttgtggttgtgattctctccattgta
ggtatgtttctggctgagcttatagaaaaatattttgtgtcccctaccctgttccgagtg
atccgtcttgccaggattggccgaatcctgcgtctaatcaaaggagcaaaggggatccgc
acgctgctctttgctttgatgatgtccctccctgctttgtttaacatcggccttctgctc
ttcctggtcatgttcatctatgccatctttggaatgtccaactttgcttatgttaaaaag
gaagctggtattaatgacatgttcaactttgagacatttggcaatagcatgatctgcctg
ttccagattaccacctctgctggctgggatggattgttggcacctattctcaacagtgca
ccaccagactgtgatccaaaaaaagttcatcctggaagttcagttgaaggagactgtggt
agcccctctgttggaatattctattttgtcagttatataatcatatcattcctggttgtg
gtgaacatgtacatcgctgtcatcctggagaacttcagtgttgccactgaagaaagtact
gagcccctgagtgaggatgactttgagatgttttatgaggtttgggagaaatttgatcca
gatgcaacccagtttatagaatacagcaaactctctgactttgcggctgccctggatcct
ccgcttctcatagcaaaaccaaacaaagtccagctcattgccatggatctgcccatggtc
agtggtgaccggatccactgccttgacatcttatttgcttttacaaagcgtgttctgggt
gaaggcggagagatggattctcttcgttcacaaatggaagaaaggttcatgtccgcaaat
ccttctaaagtgtcttatgaacccattacgactacactcaaacgaaaacaagaggatgta
tctgctactgtcattcagcgtgcttacagacgctaccgcttacggcaaaatgtcaaaaac
atatcaagcatatatataaaagatggagacaaagatgatgatttgcccaataaaggagat
atggtttttgataatgactcaagtctagaaaaaacagatgtgaccccatctaccatctct
ccaccttcatatgatagtgtaacaaagccagacaaagagaaatatgaaaaagacaaaaca
gaaaaggaacaccaagggaaagatggcaaagaaagcaaaaaatag
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integrated database retrieval system
