KEGG   Loxodonta africana (African savanna elephant): 100676072Help
Entry
100676072         CDS       T04351                                 

Gene name
HDAC4
Definition
(RefSeq) histone deacetylase 4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04371  Apelin signaling pathway
lav05034  Alcoholism
lav05165  Human papillomavirus infection
lav05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    100676072 (HDAC4)
 09160 Human Diseases
  09161 Cancers: Overview
   05203 Viral carcinogenesis
    100676072 (HDAC4)
  09165 Substance dependence
   05034 Alcoholism
    100676072 (HDAC4)
  09172 Infectious diseases: Viral
   05165 Human papillomavirus infection
    100676072 (HDAC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lav03036]
    100676072 (HDAC4)
Enzymes [BR:lav01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100676072 (HDAC4)
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100676072 (HDAC4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 100676072
NCBI-ProteinID: XP_023413483
LinkDB All DBs
Position
Unknown
AA seq 1152 aa AA seqDB search
MPEWALASLAPRTRHISTAPGGPCCLPEHLWREAADSMPRKGPVSSPTALRGPRFQTEGR
RGDLTPCCLLGEAPAWGTHDGLSGRDQPVELLSPARVNHMPSTVDAVTALPLQVAPTAVP
MDLRLDPPFPLPVAEPALREQQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQL
HEHVKQQQEMLALKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVAS
TEVKMKLQEFVLNKKKALAHRSLNHCISSDPRYWYGKKKNSSLDQSSPPQSGVSASYNHP
VLGMYDAKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVT
DSACSSAPGSGPSSPNNSSSNVSSENGITPAVPSIPAETTLAHRLVAREVTQLPLYTSPS
LPNITLGLPATGPSAGAAGQQDAERLALPALQQRIPLFPGTHLAPYLSAAPLERDGGAAH
NPLLQHLVLLEQPPPQTPLVAGLGTLPLHAQSLVGADRVSPSVHKLRQHRPLGRTQSAPL
PQNTQALQHLVIQQQHQQFLEKHKQQFQQQQLHVSKIISKPSEPTRQPESHPEETEEELR
EHQALLEEPCLDRLPGQKGVHTLAGVQVKQEPVESDEEETEAAREAEPGQRQATEQELLF
RQPLLEQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPAKPRF
TTGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSQCECIRGRKATLEELQ
TVHSEAHALLYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAAR
LAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVS
RILIVDWDVHHGNGTQQAFYSDPSVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNM
AFTGGLDPPMGDAEYLTAFRTVVMPVAVEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARC
FGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKTLQQRSNAN
AIRSMEKVIEIHSKYWRSLQRTASTVGYSLVEAQKCENEEAETVTAMASLSVGVKSAEKR
PDEEPMEEEPPL
NT seq 3459 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagtgggcacttgctagcctggcccctaggactcggcacatctccacagcccca
ggagggccctgctgcctcccagagcacctgtggcgtgaggctgctgacagcatgccccga
aagggtccggtttcatcacccacagccctgcgtggtccccgcttccagactgagggtaga
cgaggtgacctgaccccctgctgcctactgggagaggccccagcctggggcacgcatgac
ggactttctggccgggaccagccggtggagctgctcagccctgcccgtgtgaaccacatg
cccagcacagtggacgcagtcacagcactgcccctgcaagtcgctcccacggctgtgccc
atggacctgcgcctggacccaccgttcccgctgcccgtggcggagcctgccctgcgcgag
cagcagctgcagcaggagctcctggccctgaagcagaagcagcagctccagaggcagatc
ctcatcgccgagttccagcggcagcatgagcagctgtcccggcagcacgaggctcagctc
cacgagcatgtcaagcagcagcaggagatgctggccctgaagcaccagcaggagctgctg
gaacaccagcggaagctggagcggcaccgccaagagcaggagctggagaagcagcaccgg
gagcagaagctgcagcagctcaagaacaaggagaagggcaaggagagtgcagtggccagc
acggaagtgaagatgaagctacaggagtttgtcctgaacaagaagaaggcgctggcccac
cgcagcctgaaccactgcatctccagtgaccctcgctactggtacgggaaaaaaaagaac
agctccctcgaccagagctcgcccccccagagcggggtgtcagcctcctacaaccacccg
gtcctgggcatgtacgacgccaaagacgactttccgctcaggaaaacagcttctgagccc
aacctgaagttacggtccaggctaaagcagaaagtggctgagagacggagcagccccctg
ttgcgcagaaaagatgggccagtggtcaccgctctgaaaaagcgcccattggatgtcaca
gactccgcgtgcagcagtgccccgggctccgggcccagctcacccaacaacagctccagc
aacgtcagctcggagaacggcatcacgccggcggtccccagcatcccggccgagaccacc
ctggcgcacagactggtggcccgcgaggtgacacagctccctctctacacatcaccttcc
ttgcccaacatcaccctgggacttcctgccactggcccttctgctggggcggccggccag
caggatgctgagcgccttgctctcccagcgctccagcagcggatccccctcttccctggc
acccacctcgccccctacctgagtgctgcgcccctggagcgggacggcggggccgcacac
aaccctctcctgcagcacctggtcttactggagcagccgccgccacagacgcccttggtc
gcaggcctgggcacgctgcccctccacgcccagtccctggtcggtgcagaccgggtgtcc
ccgtcggtgcacaagctgcggcagcaccgcccgctggggcgcacgcagtcagcaccgctg
ccccagaacacccaggccctgcagcacctggtcatccagcaacagcaccagcagttcctg
gagaagcacaagcagcagttccagcagcagcagctgcacgtgagcaagatcatctccaag
ccgagcgagccaacccggcagcccgagagccaccccgaggagacagaggaggagctccgg
gagcaccaggccttgctggaggagccctgcctggaccggctgccaggccagaagggggtg
cacacgctggccggcgtgcaggtgaagcaggagcccgtggagagcgacgaggaggagaca
gaggctgcccgggaggccgagccaggtcagcgccaggccaccgagcaggagctgctcttc
agacagcctctcctggagcagcagaggatccaccagcttaggaactaccaggcgtccatg
gaggcggctggcatccctgtgtccttcggtggccaccggcccctgtcccgggcgcagtcc
tccccggcgtctgccaccttccccatgtctgtgcaggagccccccgccaagccgcgcttc
acgacaggcctcgtgtacgacacgctgatgttgaagcaccagtgcacctgcgggaacacc
aacagccatcccgagcacgccggccgcatccagagcatctggtcacgtctgcaggagacc
ggcctccgcagccagtgtgagtgcatccgtggccgcaaggccacgctggaggagctgcag
acggtgcactcagaggcccacgcgctgctttacggcaccaatcccctcaaccgccagaaa
ctggacagtaagaaacttctaggctccctcacctctgtgtttgtgcggctcccctgtggt
ggtgttggggtggacagcgacaccatatggaacgaggtgcactcgtcgggggcggcccgc
ctggccgtgggctgtgtggtggagctggtcttcaaggtggctacaggcgagctgaagaat
ggctttgcggtggtccgccccccgggacaccatgcagaggagagcacgcccatgggcttc
tgctacttcaactccgtggccgtggcagccaagcttctccagcagaggttgagtgtcagc
aggatcctcatcgtggactgggacgtgcaccacgggaacgggacgcagcaggccttctac
agcgaccccagcgtgctgtacatctccctgcaccgctacgacgatgggaacttcttcccg
ggcagcggggcccctgatgaggtgggcacaggacccggcgtgggcttcaacgtgaacatg
gccttcactggcggcctcgacccccccatgggtgacgccgagtacctgactgctttcagg
acagtggtcatgccagttgctgtcgagtttgcgccggacgtggtgctggtgtcgtcaggc
ttcgacgcggtggagggtcaccccacacccctcggaggctacaacctctccgccagatgt
ttcgggtacctcacgaagcagttgatgggcctggccggcggccgcatcgtcctggccctg
gaaggtggccacgacctgacggccatctgtgatgcctcagaagcctgcgtctctgccctg
ctggggaacgagctcgaccctctcccagagaagactttacagcaaagatccaacgccaac
gccatccggtccatggagaaggtcatcgagatccacagcaagtactggcgctccctacag
cgcaccgcctcaaccgtggggtactcgctggtggaggcccagaagtgcgagaacgaggag
gctgagacggtcaccgccatggcctcactgtccgtgggcgtcaagtcggctgaaaagaga
ccagacgaggaacccatggaggaggagccgcccctgtag

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