KEGG   Loxodonta africana (African savanna elephant): 100676340Help
Entry
100676340         CDS       T04351                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100676340 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lav03400]
    100676340 (LIG4)
Enzymes [BR:lav01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100676340 (LIG4)
DNA repair and recombination proteins [BR:lav03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     100676340 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_IV BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme LIG3_BRCT
Motif
Other DBs
NCBI-GeneID: 100676340
NCBI-ProteinID: XP_003414085
LinkDB All DBs
Position
Unknown
AA seq 916 aa AA seqDB search
MASVAASQTSPAVASHVPFADLCSTLERIQRSRGRAEKIKHFQEFLDSWRKFHDALHKNQ
KDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTG
TRGDTGDFAMIAYFVLKPRCLQKGSLTIQQVNDILDSVASNNSAKKKNLVKKSLLQFIAQ
SSALEQKWLIRMILKDLKLGVSQQVVFSLFHDDAAELYSVTTDMEKVCRQLHDPSVGLSD
ISITLFSAFRPMLAAIADIRHVERDMKHQSFYIETKLDGERMQMHRDGDVYKFFSRNGYD
YTDQFGDSSQQGSLTPFIHGAFQTNTQNCILDGEMMAYDPNTQSFMQKGNKFDIKRMVED
SDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSGIFTPIPGRIEIVQKTQAHTKKEVIDA
LNEAIDKREEGIMIKYPLSIYKPGKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGLRG
GMMSHFLCAVAEKPPTGEKPSVFHTVCRVGSGYTMKELYDLGLKLANHWKPFNRKAPPSS
ILCGTEKPEVYIEPCSSVIVQIKAAEIVPSDMYKTDCTLRFPRIEKIREDKEWHECMTLD
ELEQLRGKASGKLASRHLHVDDDDDEPQEKKRKAAVPKLKKAVGIIEHFKAPNLSNINKV
SNIFEDVEFCVMNGIEGHSKPDLENRIAEFGGYIVQNPGPDTACIIAGSENIRVRNIISS
NKHDVVKPDWLLECFKTKSCVPWQPRFMIHMCPSTKQHFALEYDCYGDSYFVDTDLNQLR
EVFSVIKHSNEQTPEEMASAIADLEYRYSWDSSPLSMFRHHTVYLDLYAVINDLSTKIEG
ARLATKALELRFHGAKVVSCLAEGVSHVIVGEDHSHVADFKAFRRTLKRKFKILQEAWVT
DSIDRCELQEENQYLI
NT seq 2751 nt NT seq  +upstreamnt  +downstreamnt
atggcttcagtggctgcctcccaaacttcaccagctgttgcgtcacatgttccttttgca
gatttatgttcaactttagaacgaatacagagaagcagaggacgtgcagagaaaatcaaa
cacttccaggagtttttagattcttggagaaaattccacgatgcccttcataagaaccaa
aaagatgtcacagactctttttatccagcaatgagactcattcttcctcagctagaaaga
gagagaatggcatatggaatcaaagaaactatgcttgctaagctttatatcgaattgctt
aatttgcccagagaaggaaaagatgcccttaaacttttaaattacagaacacccacggga
actcgtggagatactggagactttgcaatgattgcgtactttgtgttgaagccaaggtgt
ttacagaaaggaagcttaaccatacagcaagtaaatgacattttggattcagttgccagc
aataattctgccaaaaaaaagaacctagtaaagaagagtcttcttcagtttatagctcag
agttcagcacttgaacaaaaatggctcatacgaatgattttaaaggacttaaagcttggt
gttagtcagcaagttgtattttctctttttcacgacgatgctgctgagttgtatagtgtc
accacagatatggaaaaagtctgcaggcaactgcatgacccttcagtaggactcagcgat
atctccatcaccttattttctgcctttcgaccaatgctagctgctatagcagacattcgg
cacgttgagagggacatgaagcaccagagtttctacattgagaccaagctagatggcgag
cgtatgcaaatgcaccgagatggggatgtgtacaaattcttctcccgaaatggatatgac
tatactgatcagtttggtgactcttcacagcaggggtccctgacgcctttcattcatggt
gctttccaaacaaatacgcaaaactgtatcctggatggtgaaatgatggcctacgatcct
aatactcagagttttatgcaaaagggaaataagtttgatattaaaagaatggtagaggat
tccgatctgcaaacttgttactgtgtttttgatgtactgatggttaataataaaaagcta
ggacatgagaccctgagaaagaggtatgaaattcttagtggtatttttacaccaatacca
gggagaatagaaatagtgcagaaaacacaagcacatactaagaaagaagtaattgatgct
ttgaacgaagcgatagataaaagagaagagggaatcatgataaaataccctttgtccatt
tacaagccaggcaaaagaggtgaaggatggttaaaaattaagcccgagtatgtgaatggt
ctaatggatgaactggacatcttaattgttggaggctattggggtaaaggtttacggggt
gggatgatgtctcattttctgtgtgccgtggcagagaagccacctaccggtgaaaagcca
tctgtgtttcacactgtctgtcgcgtgggctcaggttacaccatgaaagaactatatgac
ctgggtttgaaattggccaaccattggaagccttttaatagaaaagctccccccagtagc
attttatgtggaacagagaagccagaagtatacattgagccttgtagttctgtcattgtt
cagattaaggcagcagagattgtccccagtgatatgtataaaactgattgcactttgcgt
ttcccacgaattgagaagataagagaagacaaagagtggcatgaatgcatgactctggat
gagttagagcagcttagggggaaagcctctggaaagctcgcatccagacaccttcatgta
gatgacgatgacgatgaaccgcaagaaaaaaagcggaaagctgctgtcccaaagttgaag
aaagctgttggaattatcgaacacttcaaagcacctaatctttctaacataaacaaagtt
tctaatatatttgaagatgtggagttttgtgttatgaatggaatagaaggccattcaaag
cctgatctggaaaacagaattgcagaatttggtggttatatagtgcaaaatccgggccca
gacacggcctgcataattgcagggtctgagaacatcagagtgagaaacataatttcttca
aataaacatgatgtcgtgaagcctgactggcttttagagtgttttaagaccaaaagctgt
gtgccgtggcagcctcgctttatgattcatatgtgtccatcaacaaaacaacactttgct
cttgaatacgactgctatggtgatagttattttgttgatacagatttgaaccaactcagg
gaagtgttctcagtaattaaacattctaacgaacagactcctgaagaaatggcctctgcg
attgctgatctagaataccgatattcctgggacagctctcctctcagtatgtttcgacac
cacacggtttatttggacctgtatgctgttattaatgacttgagtaccaaaattgaggga
gcaagattagctactaaagcgttggagcttcggtttcatggagcaaaagtagtttcttgt
ttagctgagggagtttctcatgtaatcgttggggaggatcatagtcacgttgcggatttt
aaagcttttcggagaacccttaaaagaaagtttaagatcctacaagaagcttgggtaact
gactcaatagacaggtgtgaattacaggaggaaaatcaatatttgatttaa

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