Lactobacillus sp. wkB8: LACWKB8_0915
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Entry
LACWKB8_0915 CDS
T03355
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
law
Lactobacillus sp. wkB8
Brite
KEGG Orthology (KO) [BR:
law00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
law03032
]
LACWKB8_0915
03400 DNA repair and recombination proteins [BR:
law03400
]
LACWKB8_0915
Enzymes [BR:
law01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LACWKB8_0915
DNA replication proteins [BR:
law03032
]
Prokaryotic type
DNA Topoisomerases
LACWKB8_0915
DNA repair and recombination proteins [BR:
law03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LACWKB8_0915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
zf-ribbon_3
Toprim_4
Auto_anti-p27
Toprim_2
C1_2
Motif
Other DBs
NCBI-ProteinID:
AIS09186
LinkDB
All DBs
Position
938842..940953
Genome browser
AA seq
703 aa
AA seq
DB search
MPTKSKPKKRKKTLVIVESPAKAKTIEKYLGRNYRVIASKGHIRDLPKSQMGIDFDNNYK
PKYISIRGKGDTIKELKAEAKKAKDVYLASDPDREGEAIAWHVAHVLNLDQNDKNRVTFN
EVTKDAVKNSFKNPRTIDMDTVNAQQARRILDRIVGYSLSPILWDKVKKGLSAGRVQSVA
LKLVIDREKEIKNFKPQEYWTIDAEFKKSRQTFKGQFWGVDGKKVDLPNNDAVQNILAKI
DKKKDFQVENVLKRERRRQPAAPFTTSTMQQEANKRLNYRTRRTMSIAQQLYEGISLGKQ
GTVGLITYMRTDSKRTSPVAQAEASKFLNENYGKEYAAKGARHFKNQEDAQDAHEAIRPT
SVYRTPESLKSVLTTEQYRLYQLIWSRFLASEMTPAVYDTVRADITQNGVVFRTTGSKMK
FAGFTKVYDNQQEKNVELPELNDGDKVKLAKSDNKQHFTMPPARYTEASLVHSLEENGVG
RPSTYAPTIDTIQRRYYVKLDGKSIVPTELGEIVDNLIEKFFPDIVNIDFTAQLENDLDG
IEEGKKNWVKVIDDYYHPFKKELDKADAGIKKVQIKDEPAGFNCDICGAPMVIKMGRYGK
FYACSRFPDCRNTKAIVKKVGVTCPKCGKGDVVEKKSKRNRKFYGCSRYPDCDFVSWDKP
INRNCPNCGHFLVEKRNKKGPVILCPNGDYKEEQNSEKEAAES
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcctactaaatcaaagccaaagaaacgtaagaaaacattagtaatagttgagtctccg
gcaaaggctaaaactattgaaaagtatttagggcgtaattaccgtgtaatcgcatctaaa
ggccatattcgtgacttacctaaatcacaaatggggattgattttgacaataattacaag
ccaaaatacatttcgattcgcggtaaaggcgacaccattaaagaattgaaggcggaagca
aaaaaagcaaaagatgtttatttagcatccgaccctgatcgtgaaggtgaagctattgcc
tggcatgttgcccatgtgctgaatttagaccaaaatgataaaaatagagtgacatttaac
gaagtcactaaagatgctgtcaaaaacagttttaaaaatcctagaaccattgacatggat
actgttaatgcccaacaagctcggagaattttggatagaattgtcggttattctctttcg
ccaattttatgggataaagtcaaaaaaggtttgagtgctggtcgagttcaatcggtcgcc
ttaaagctggtgattgatcgcgaaaaggaaattaaaaacttcaaaccacaggaatactgg
acaattgatgccgaatttaagaaatcccgtcagacttttaaaggtcaattttggggcgta
gatggcaaaaaagtcgatttgccgaataatgatgcggttcaaaacattttggctaaaatt
gataagaagaaagactttcaggtagaaaatgttcttaaacgtgagcgcagacggcaaccg
gcggctccttttacaacttcaactatgcagcaggaagcaaataaacgtttaaattatcgc
acccgcagaacgatgagtattgcgcagcaattgtatgaagggattagtttaggcaaacag
ggtactgttggtttaattacttatatgagaactgattccaaacggacatcaccagttgct
caagctgaggcttcaaaatttttaaatgaaaactacggtaaagaatacgctgctaaggga
gcacgtcactttaagaaccaagaagatgctcaagatgcgcatgaagctatacgtcctacc
agtgtttatcgcacgccagaatcactcaagtcagttttaacgaccgaacagtaccgtctt
taccaattaatctggtcaagatttttggctagtgaaatgacacccgccgtttatgacacg
gtcagagcagatatcacgcaaaatggggtagtatttagaactacaggttctaaaatgaaa
tttgctggctttaccaaggtttatgataaccagcaggaaaaaaatgttgagctgcctgaa
ttaaatgatggcgataaagttaaattggccaagtctgataataaacagcactttaccatg
ccacccgcaagatataccgaagcaagtctagtgcattctttagaagaaaacggcgtgggt
cgaccttctacttatgcacctactattgatacaattcaacggcgttattatgttaagtta
gatggtaaatctattgtgccgacagaattaggtgaaatagttgataatctgattgaaaaa
ttcttccctgatatcgttaatattgactttaccgcccaattggaaaatgacttagacgga
attgaagaaggtaagaaaaactgggtaaaggtaattgatgattattatcatccctttaaa
aaggaattagacaaggcagatgccggcattaaaaaggtgcagattaaggatgagcctgct
ggctttaactgtgatatttgtggtgctcccatggtgattaaaatgggacgctacggcaag
ttttatgcctgctcacgctttcctgattgtcgcaataccaaggcaattgttaagaaagtt
ggtgttacttgccctaagtgcggtaagggtgacgtagttgagaagaagtctaagcgtaac
cggaagttttacggttgttctcgttatcctgattgtgactttgtttcttgggataagccg
attaaccgcaactgccctaattgtggtcatttcttggtggaaaagagaaataaaaaggga
cctgtaattctttgtcctaatggggattacaaagaagaacaaaactctgaaaaagaagct
gcagaaagttaa
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