Lactobacillus sp. wkB8: LACWKB8_1219
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Entry
LACWKB8_1219 CDS
T03355
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
law
Lactobacillus sp. wkB8
Pathway
law03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
law00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LACWKB8_1219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
law03400
]
LACWKB8_1219
Enzymes [BR:
law01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LACWKB8_1219
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LACWKB8_1219
DNA repair and recombination proteins [BR:
law03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LACWKB8_1219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S4e
Auto_anti-p27
ZNF512_C2H2
Bcr-Abl_Oligo
Motif
Other DBs
NCBI-ProteinID:
AIS09488
LinkDB
All DBs
Position
complement(1259617..1260447)
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AA seq
276 aa
AA seq
DB search
MPEMPEVETVRRTLLPLIKGKTIKEVTVWYPKIITGDAKEFKQQLVGKKITTIDRYAKYL
LIRLSGNLTVVSHLRMEGKYRLVKINTKKDKHDHVQIVFSDNSALRYNDVRKFGRMQLIK
TGTEKEKTGISKLGAEPNSAAFTVSYLQNGLARKKKNIKNTLLDQSVVAGLGNIYVDEVL
WETKIHPLSQANTIPAEKVAQLHDNINSLIELAIAERGTTIHTYLDANGKTGGFQKMLQV
YGHKGEPCVRCSTPLEKIKVNGRGTTFCPKCQVIYK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaatgccagaagttgagactgtgagacggacacttcttcctcttatcaaagga
aagacaatcaaagaagtaacagtctggtatccaaagattataactggtgatgcaaaagaa
tttaagcagcagttagttggtaaaaaaatcaccacaattgatcgttatgctaaatatttg
ttaattcggcttagcggcaatttaacagtagtgtcacatttgcgcatggagggtaagtat
cgtttagttaaaataaatactaaaaaggataaacacgaccacgtgcaaattgtttttagt
gataattcggcattgcgttataacgatgtgcgtaagtttgggcgcatgcagttaattaaa
acgggaactgaaaaagaaaagacgggtattagcaaattaggtgcagaacccaactcagca
gcttttaccgtttcttatttacaaaatggtttagcacgtaaaaagaaaaatattaaaaac
acactccttgaccaatctgttgttgcaggtttgggcaatatctatgttgacgaggttttg
tgggagacaaaaattcacccattaagtcaagccaataccattcccgcagaaaaagtagca
caattgcacgataatattaattcgttaatagaattggcaattgctgaacgaggtactaca
attcatacctatctggatgcaaacggtaaaacaggaggttttcaaaaaatgttgcaggtt
tatggtcataaaggtgaaccatgtgtgcgttgtagtacaccacttgaaaagattaaagtc
aatggacgaggaactactttttgtcctaaatgtcaggtgatttataaatga
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