Lentilactobacillus buchneri NRRL B-30929: Lbuc_1328
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Entry
Lbuc_1328 CDS
T01477
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
lbh
Lentilactobacillus buchneri NRRL B-30929
Pathway
lbh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Lbuc_1328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbh03400
]
Lbuc_1328
DNA repair and recombination proteins [BR:
lbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lbuc_1328
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Lbuc_1328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_16
AAA_33
nSTAND3
AAA_21
nSTAND1
APS_kinase
DnaJ_CXXCXGXG
AAA_14
NACHT
AAA_23
AAA_22
RNA_helicase
AAA_7
cobW
T2SSE
SLFN-g3_helicase
Viral_helicase1
AAA_24
Septin
NB-ARC
MMR_HSR1
MeaB
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AEB73582
LinkDB
All DBs
Position
complement(1395336..1398212)
Genome browser
AA seq
958 aa
AA seq
DB search
MAMDKIVIRGARAHNLKNVNVTIPKNKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYFRLLWARVGVP
ICPNDGSVISSQSVDQMIDQIMKLPERTKLQILSPIVRGKKGQHKKIFEKIKREGFVRVQ
VDGKTYDIDEAPELDKNKNHDINIIIDRIIVKDGINNRLSDSLEAALRLSGGYAVADFLG
ERDPLMFSEHYACPICGFTVGELEPRLFSFNSPLGACPDCDGLGMKLEVDEDLVVPDRTK
TLAEGALAPWNSASSKWYPNMLKQVCDAQGIDMDVPFNKLPKKQQTFVLYGSKTKSFHFV
LQSDFGGIRDVDGPFEGVVNNVDRRYHNTSSDFTRDNLSQYMTELTCQTCHGYRLNRQAL
AVKVGKHNVAQISALDVTAELNFFKSLTFGEQDTMIAKSIIKEITDRLTFLRNVGLDYLT
LSRSARTLSGGEAQRIRLATQIGSNLTGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGN
TLIVVEHDEDTMRAADYIVDIGPGAGQQGGRVMAVGTPADIEKVPESITGQYLSGKRFIP
VPDKRRKGNGKEIRVTGAAENNLKDLTVDFPLGKMVVMTGVSGSGKSTLVNDILKKALAQ
KLNHNSEKPGKYKSISGYKNIEKIIDIDQTPIGRTPRSNPATYTGVFDDIRGLFANTNDA
KLRGFKKGRFSFNVKGGRCETCHGDGILKIEMNFLPDVYVPCEVCHGKRYNAETLEVEYK
GKNIADVLDMTVDEAVDFFSAIPKISRKLQTIKDVGLGYVHLGQPATTLSGGEAQRMKLA
SELHKKANGQNFYILDEPTTGLHSEDIRRLLGVLQKLVDQGNTVLIIEHNLDVVKSADYL
IDLGPEGGDGGGTVVATGTPEQLAKVPESYTGQYLKPVLERDKKLTKQAEKQAVKASK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
ttggcaatggataaaatcgtcattcgtggggcacgtgcccacaacttaaaaaatgtgaat
gtgacaattccaaaaaataaactggttgtcatgactggcttatcgggctcggggaaaagc
tcgctggccttcgatacactttatgcggaaggccagcgccgatacgttgaaagtttgtca
tcatacgcgcgtcaatttctggggcaaatggataagccggatgtcgattcaattgatggc
ttgagtccagcaatttcgattgatcaaaaaaccacttccaagaaccctaggtcgacggtt
ggaacggtcactgaaatcaatgattattttcgactgttgtgggcccgagtgggggtacca
atctgtcccaacgacggctcggtgatttccagtcaatcagttgaccagatgatcgaccag
atcatgaaactgcctgagagaacaaaattgcagattctgtcaccaatcgtacgtgggaaa
aaaggtcaacacaaaaagatttttgaaaagatcaagcgtgaaggctttgttcgggtacag
gttgatggcaaaacctatgatattgatgaagcaccggaactcgataaaaataagaaccat
gacattaatattattattgaccgaattattgtcaaagatggcattaataaccgattgtca
gattcattggaagctgctttgcgccttagtggcggttatgccgtcgctgattttttgggc
gagcgcgatccactgatgttttcagaacactacgcctgcccaatttgcggattcacagtc
ggtgaactcgaaccacggctgttttcctttaactcaccgctgggcgcttgtcccgactgt
gatggtttgggaatgaagctggaagtcgatgaagatttggtggttcctgatcgaaccaag
actttggccgaaggggctctggcaccttggaattctgctagttccaaatggtatccgaat
atgctcaagcaggtttgtgatgctcaaggcatcgacatggacgtgccatttaacaaactg
ccgaagaaacagcaaacctttgtgttatacggttcaaagaccaaatcattccattttgtc
ctccaaagtgactttggcggcatccgtgatgttgacggcccgtttgaaggggttgtcaat
aacgtcgaccggcgctatcacaacaccagcagcgactttaccagggacaatttaagtcag
tatatgaccgaattaacttgtcagacctgccacggctatcgtttgaaccgtcaggcattg
gctgttaaggttggcaagcataacgttgcccaaatttcagctcttgatgtcacagcagaa
ttgaacttctttaaatcgctgacatttggtgaacaggatacaatgattgccaaatcaatt
atcaaagaaattactgatcgactgacttttctaagaaatgttgggttggattacctgacc
ctctcacgttccgctcggactttatcaggcggggaagctcagcgaattcgcttggcaact
cagattggttcaaatttgactggcgttctttatattcttgacgagccctcaattgggctg
catcaacgggataatgaccgactgattgcctccctcaagaaaatgcgcgatttgggcaat
accctgatcgtggtcgagcatgatgaggataccatgcgggctgccgattatatcgtcgac
atcggcccgggtgccggtcagcaaggcggtcgggtaatggccgtcggaacacccgccgac
attgaaaaagtaccggaatcgatcaccggccaatacctctcaggcaagcggtttattccg
gttccagataagcgccgcaagggaaacggtaaggaaattcgagtcactggtgctgctgag
aacaacctcaaggatttgacggttgattttccgctcggcaagatggttgtgatgacaggt
gtctccggctccggtaagtcgactttggtcaatgatattttgaaaaaggcccttgcccag
aaactcaatcataattccgagaagccgggtaaatacaagtccatttctggttataaaaat
attgaaaaaattatcgatattgaccaaacgccaatcggtcgaacaccgcgttccaaccca
gccacctataccggtgtgtttgacgacattcgcggcttgtttgccaataccaacgatgcc
aaacttcggggcttcaaaaagggccgctttagttttaacgttaagggcggtcgctgtgaa
acctgtcatggtgacggcatcttgaagattgaaatgaactttctgccagacgtttacgtt
ccttgtgaagtatgtcatggcaagcggtacaatgccgagacccttgaggttgaatacaaa
ggcaagaatatcgccgatgtattggacatgaccgttgacgaagccgtggactttttcagt
gccatccctaaaatttctcgcaagcttcaaacaattaaagacgttggtttgggatatgtt
catttgggccagccggccacaactttatctggtggggaagcccaacgaatgaagttggct
tctgagctgcataagaaggccaatggccaaaacttctacattctcgatgaaccaaccacc
ggtcttcatagtgaggatattcggcgattattaggcgtccttcaaaagctggttgatcaa
ggcaataccgttttgatcattgagcacaacttggatgtcgttaagagtgccgattatctg
attgatttgggaccggaaggcggcgatggtgggggaacggtcgttgcgaccgggactccc
gaacagttggccaaagtccctgagagttacactggtcagtaccttaagcccgtccttgaa
agggataagaaattgaccaagcaggctgaaaagcaggcagtcaaagcaagtaaataa
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