Leptospira biflexa serovar Patoc Patoc 1 (Paris): LEPBI_I2503
Help
Entry
LEPBI_I2503 CDS
T00693
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lbi
Leptospira biflexa serovar Patoc Patoc 1 (Paris)
Pathway
lbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LEPBI_I2503 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbi03019
]
LEPBI_I2503 (recQ2)
03400 DNA repair and recombination proteins [BR:
lbi03400
]
LEPBI_I2503 (recQ2)
Enzymes [BR:
lbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LEPBI_I2503 (recQ2)
Messenger RNA biogenesis [BR:
lbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LEPBI_I2503 (recQ2)
DNA repair and recombination proteins [BR:
lbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LEPBI_I2503 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ABZ98589
UniProt:
B0SLK3
LinkDB
All DBs
Position
I:complement(2587224..2588669)
Genome browser
AA seq
481 aa
AA seq
DB search
MKLNLPLQTFGISEFRGNQKSVIEHVLNGGNALVLMPTGMGKSVCYQIPALEMPGTCIVI
SPLIALMKDQVDSLQKKGINATYINSSLSRSERMERYERLNSGGWKIVYVSPERFQKKEF
LEVIQSIPISLLAIDEAHCISQWGHDFRPDYTKIRWFREILKFPPTIALTATASQRVQND
ILEQMGILPKDIQIFDDGLFRPNLHLSVTECFDTDTKYKLILEELKSNQEVSILYFSLIQ
DLEKMSHWLDTKRIRHLVYHGKRSNQDRSATLSKFLTSDQVILLATNAFGMGVDKKNVRN
VYHVQIPGSIEAYYQEIGRAGRDGKPSQCKLFYTEDDLAIQMDFIDWQNPDLGYLKKLYQ
LMVQKENQLSALDYQTIQSFMTYKNKSDHRVQTAINLLCRVGLVSGDLEKGTLQIENPWD
PSLFVQEDLEIKKKEGGKRLYQMLQYTKTEDCRRKFIHQYFDSPFTSCNNCDRCLNASIS
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaatttaccactgcaaacctttggcatttccgagtttcgagggaaccaaaaa
tctgtcattgaacatgtattaaatggtggtaatgcgctcgtactcatgccaacaggtatg
gggaagtctgtttgttaccaaatcccggccttggaaatgccagggacatgtatcgttata
tctcctctcattgcactaatgaaagaccaagtggattctttgcaaaaaaaagggatcaat
gccacctatatcaattcgagtttgagtcgttccgaaagaatggagcgttatgaaagatta
aactctggtggatggaaaattgtatatgtttctcccgaacggtttcaaaaaaaagaattt
ttggaagtgatccaatccattccaatctctttacttgccatagacgaagcacattgtatc
agtcaatgggggcatgattttcgccccgattataccaaaattaggtggttccgtgaaatt
ttaaaatttccacccaccattgcgctaacggcaaccgcttcccaacgcgtgcaaaatgat
attctggaacaaatgggtattttgccgaaagacattcaaatttttgatgatggattgttt
cgtcccaatttacatttatcagttacggaatgttttgatacggataccaaatacaaattg
atattagaagaattaaagtcgaaccaagaggtttcgattttatactttagtttgatccaa
gatttagaaaaaatgagtcattggttggataccaaacgaatacggcatttggtttaccac
ggaaaacgatccaatcaagatagaagtgccacactctctaagttccttacatctgatcaa
gtgatcctacttgcaacgaatgcatttggaatgggtgtcgataaaaaaaatgtccgcaat
gtttaccatgtacaaattccaggtagtatcgaagcctattaccaagaaataggtagagca
ggtcgggacggaaaaccatctcaatgtaaactattttatacggaagatgatttagcgatt
caaatggattttattgattggcaaaatccagatcttggatatttaaaaaaattataccaa
ttgatggtgcaaaaagaaaaccaactgtctgcattggattaccaaaccatccagtctttt
atgacttataaaaataaatcagaccaccgcgtacagacagcaatcaatttgttatgtcgt
gtgggactcgtttctggtgatttagagaaaggtaccttacaaatagaaaatccttgggat
ccatccctctttgtacaagaagacctggaaatcaaaaaaaaagaaggtggaaaacgcctc
taccaaatgcttcaatataccaagacggaagattgtagaagaaagtttatccaccaatat
tttgattcaccatttacctcttgcaacaattgtgatcgatgtctcaatgcatcgatctca
acttag
DBGET
integrated database retrieval system