Leptolyngbya boryana: LBWT_33740
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Entry
LBWT_33740 CDS
T04848
Name
(GenBank) methyl-accepting chemotaxis sensory transducer with GAF sensor
KO
K11525
methyl-accepting chemotaxis protein PixJ
Organism
lbo
Leptolyngbya boryana
Pathway
lbo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LBWT_33740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lbo02035
]
LBWT_33740
Bacterial motility proteins [BR:
lbo02035
]
Pilus system
Positive phototactic motility proteins
LBWT_33740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
GAF_2
MCPsignal
GAF_3
HAMP
Motif
Other DBs
NCBI-ProteinID:
BAS57418
LinkDB
All DBs
Position
3584729..3588964
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AA seq
1411 aa
AA seq
DB search
MSASRRTEPTLDMSSMMSSEPTLEEFTAFLSETPVEISSNGADLSIEVSESPGYSNGNGV
SRSEPEEAGRDIQQVVTALTGLKSELKRAGLLDKPNVQNLFRQVAEFAATQPKKTNQQGA
SRELRYQRKQLNAISAQMRQMPDLDALLKGFVKVARETLQVDRAIIYRFGAQEGGSIVAE
SVQRGWTPALGEAPALTCFCFDQPEDYVKNQVVVIEDITRVDLMPYQHQLLDQLQVKASL
SLPIRVAGEAWGLLVVHQCSRARLWQEVEINLLYQLCLELTINLQQSDFALRLAQQGETE
KAVFKVIDRIRRSLDLDVVFRTTTQEIRQLLKADRVSIYRFEEDWSGEFVAESTAPGWTS
LLQEQIDNPVLKENVSECSVRSLGKLTDTYLQQTQGGRLAKGVNFRAVTDIHQTGFSPCY
IEMLERYQARAYVMIPILQNQKLWGLLAAYQNSGPRQWQEAEIALLMQIGTQLEVALQQA
ENLHQLKSRTAQLAKVTERERAGARVIEKIRTSLDLNTIFKTATQEVRQLLNTDRVGVYR
FEQDWSGEFIAESVTAGWRSVMEEQLSDSSFRENASDCTIRSMGKSAKSIDTYLEQTQGG
AYTRGETFRAVEDIYKANFSPCYLGVLERFQARAYIIVPIMQGDRLWGLLAAYQNSEARR
WEESEISLMVQIGTQLGVAIQQAEYLEKVENQAEQLTKSAARERNFIRVIDQVNKSVLER
MRQFESTETIFGQTTQQIRQFLQADRIAIYRFNQDWGGEFVSESVAPGWVRLVGADVKTA
WDDTHLQETQGGRYRNNERFVVNDIYQVGHLPCHLEILEQFQVKAYAIVPIFSGQKLWGL
MGAYQNSAPRQWEESEVNLLAQLAAQLGVAIQQADYVSQIQRQADREKVLAKVSDRIRQS
IDFVRQSADISSVFQVITQDIRQLLKVDRAAIYRFNPDWSGDFIYESINSGWGKLVGTEI
GTNVKDTYLRETQGGRYRNRESLAIDDIYNAGHDPCHVELLEQFEAKAYALVPVFKHQEL
WGILAVYQNGSTRHWEEAEVVLLNQIAGQLGVALEQVDSLEQLRTQSEQLAQAAQREKTA
KEQLQMQVIQLLGAIKPVFSGDLTIRVPVVENEVGTIADAYNNTIQSLRKIVTQVQATST
KVASTSKNSSGAIAKLTQQAEEQLQEVTRALDQLQAMVSSTQAVATNARQVETALQQANQ
TVRSGDAAMNRTVDGILAIRETVAETSQKIKRLSESSQKISKVVSLIGSFTTQTQLLALN
ASIEATRAGEYGRGFTVVADEVRSLARQSADATREIEKLAQEIQSETSAVAAAMDTGIQQ
VVSGTGLVNETRQQLTEIINATAQISQLVQGITQATLAQTQQSKLVTQSMTDVATLASKN
SAQSSQISASFQELLNTAQQLQTSVGQFKVS
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcatcgcgtcgtactgaacccacgcttgatatgtcttctatgatgtcttcagaa
cccactcttgaggaatttactgctttcctttcagaaactcccgttgagatatcaagcaac
ggtgcggatttatcgatcgaggtttccgaatctccaggctactccaatggtaatggggtc
agtcgttcagaacctgaagaggcagggcgagacattcagcaagttgtgactgctttgaca
ggtctaaaatcagaactcaaacgggctggacttctggacaagccgaatgtccaaaatcta
ttccgtcaagttgctgaatttgctgcgactcaacccaaaaaaacgaaccagcaaggtgca
tcgcgtgagcttcggtatcagcggaagcaattaaacgcaatctctgctcaaatgcgccaa
atgcctgacttagatgctttgctcaaaggttttgtcaaagtcgcgcgcgaaaccttgcaa
gtcgatcgagccatcatctatcgctttggtgcacaagaaggcggttcgatcgtggcagaa
tcggttcagcgtggatggactccagcacttggggaagcgccggcgttaacttgcttttgc
tttgatcagcctgaagattatgtcaagaatcaagtcgtcgtcatcgaagatatcacgcgc
gtcgatttgatgccttatcaacatcagcttctggatcagcttcaagttaaagcgagctta
agcttaccgattcgtgttgctggtgaggcttggggattgctcgtggttcatcaatgttct
cgagcgcgcctctggcaagaagttgaaattaacttactgtatcaactttgcctagaattg
acgatcaatcttcagcagtctgactttgcattaaggctggctcagcaaggtgaaactgaa
aaagccgttttcaaagttatcgatcggattcgtcgatcgctggatttagatgttgttttt
cgtactactacccaagaaattcgacaattgctgaaagcggatcgggtgagcatttatcgg
tttgaagaggattggagtggtgaatttgttgcagaatccacggcaccaggttggacttcg
ctgctccaagagcaaattgataatcctgttttgaaagagaatgttagcgaatgtagtgtg
cgatcgctaggaaagctaacagatacttatctgcagcaaactcaaggcggaagattagcg
aaaggcgtcaattttagagctgtaactgatattcatcaaaccggattttcgccttgctac
attgagatgctggagcgatatcaagcaagagcgtacgtgatgattccaattttacagaat
cagaagctttggggattgcttgcagcttatcaaaactcaggtccacggcagtggcaagaa
gcagaaatcgccctgctgatgcagattggaactcagttagaagttgcacttcagcaagct
gagaacttacatcaattgaaatcccgtacagcgcaacttgcaaaagtgactgaacgtgaa
agagcaggcgcacgagtgatcgaaaagatccgcacttcattggatctcaataccatcttc
aaaactgcgacccaagaagttcgacagttattaaatacagatcgagtaggggtctaccgc
tttgagcaagattggagcggcgaatttattgcggaatctgtgacagcgggttggcgttca
gtgatggaagagcaactcagcgattcaagttttcgagagaatgcgagcgattgcaccatc
agatcgatgggtaaatctgcaaaatcgatcgacacgtatctggaacaaactcaaggtgga
gcctatacgcgaggagaaacctttagagccgttgaggatatttataaagcaaacttttct
ccctgctatctcggtgtactggagcggtttcaggcaagagcgtatatcatcgttcccatc
atgcaaggagataggctgtggggactgctggcagcttatcaaaactctgaggcgcgtcga
tgggaagagtcagaaatttctttgatggttcaaatcggaacccagcttggagttgcaatc
cagcaagctgaatatctagagaaagttgagaatcaagctgagcaattgacaaaatcagcg
gcgcgggaacggaactttattcgcgtgattgaccaggtgaataaatcagtgctagagcgg
atgcggcagtttgaaagtactgaaacgatttttggtcaaaccactcagcagattcgtcag
ttcttgcaagccgatcgcattgccatctaccgctttaatcaagattggggaggtgaattt
gtttcagagtcagttgccccaggttgggtgcgcctagttggagcagatgtcaaaaccgct
tgggacgatactcatctacaagagactcaaggcgggcgataccgaaataatgaacgcttt
gttgtgaatgacatttatcaggttgggcatttgccttgccaccttgaaattttggagcag
tttcaagttaaagcttatgcgattgttccaattttttcggggcagaagctttggggattg
atgggtgcttatcaaaactcggctccgcgtcagtgggaagagtcagaagtgaatcttctc
gctcagttggcagcacagttaggggttgcaattcagcaagctgattacgtttctcagatt
caacggcaagctgaccgagagaaagtcttggcaaaagtaagtgatcgaattcgtcaatcg
atcgactttgtgcgccaatctgctgacatcagttcagttttccaagtgatcacgcaagat
attcggcaacttctgaaagtcgatcgggctgccatttatcggttcaatccagactggagt
ggcgacttcatttatgaatcgattaatagtggatggggtaagctggttggcactgaaatt
ggtaccaatgtcaaagatacgtatctgcgggaaacccagggtggacgatatcgcaatcga
gaaagcttagcgatcgatgatatttacaatgcgggtcatgacccttgtcacgttgagctt
ctagaacagtttgaggcgaaagcttatgcgcttgttcctgtctttaagcaccaagagctt
tggggaattttggcagtctaccaaaatggaagtacccgtcactgggaagaagcagaggtt
gtattgctgaatcagattgcaggacaattgggtgttgccctagaacaagtggattcactt
gaacagttaagaacacagtccgagcagcttgctcaagcggctcaacgtgagaaaactgcg
aaagaacaattgcaaatgcaggtgattcaactgttgggtgcaattaaacctgtattctcg
ggagatttaaccatccgagttccagtcgtagaaaatgaagttggaacgatcgcagatgcc
tacaacaatacaattcaaagtttgcggaagattgtaactcaagtccaagcgacatcgacc
aaagttgcaagtacttctaagaatagtagtggtgcgatcgcaaagctgacacaacaagca
gaagagcagttgcaggaagtcactcgggctttggatcagctccaagcaatggtcagttca
actcaagcagttgcgacaaatgcgcgtcaagttgaaactgcacttcagcaggcgaatcaa
acggttcgatctggagatgctgctatgaaccggacggtcgatggaatcttggcgattcgg
gaaacggttgcagagaccagtcagaagattaaacgcttaagtgaatcttctcagaagatc
tctaaggtcgttagcttgattggaagctttacaacacagacgcaacttctagcgctgaat
gcttcgatcgaggcaacgcgtgcgggagagtatggacgtggctttacagtcgttgcggat
gaagtgcgatcgctcgcgagacaatcggcagacgcgacgcgtgaaattgagaaacttgca
caagagattcaatcggaaacgagtgctgttgcggcagccatggatacaggaattcaacag
gttgtcagtggaacagggctggtgaatgaaactcgtcagcagttgactgagattatcaat
gcaaccgcgcagattagccaactggtacaaggaattacccaggcaacgctagcacagacg
cagcagtcgaaactcgtgactcaatcaatgacagacgtggcaacactagcaagtaagaac
tctgctcagtcgagtcaaatctctgcatctttccaagagctactcaatacagctcaacaa
ctgcaaacgagtgttggacaattcaaagtcagctag
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