Loigolactobacillus backii: AYR52_07600
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Entry
AYR52_07600 CDS
T04754
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lbt
Loigolactobacillus backii
Pathway
lbt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AYR52_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbt03021
]
AYR52_07600
03400 DNA repair and recombination proteins [BR:
lbt03400
]
AYR52_07600
Enzymes [BR:
lbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AYR52_07600
Transcription machinery [BR:
lbt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AYR52_07600
DNA repair and recombination proteins [BR:
lbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AYR52_07600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SpoIVA_ATPase
DUF961
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ANK60131
UniProt:
A0A192H0V2
LinkDB
All DBs
Position
complement(1628718..1629656)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITKVDESTNYGKFVIEPLERGYGTTLGNSLRRILLASLPGAAVTSVQIDGVL
HEFSTIDGVTEDVTQIILNVKKLALKLDSDDDKTVEIDVKGPATVTAGDIEADSDVEVLN
PDLYICTVASGGHFHARMTVRKGRGYVAAEDNKVDDMPIGVLPIDSIYTPISRVNYQVES
TRVGQRNDYDKLTLDVWTDGSINPREAISLAAKILTEHLDIFVNLTDDAKNAEIMVEKEE
THKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEADMMKVRNLGRKSLEEVKAK
LADLGLSLRKED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgagaaaccaaacattaccaaagttgatgaaagtacaaactatggtaag
tttgtcattgaaccgctagaacgtggttatgggacgactttgggtaattctttacggcga
attctattggcatcattaccaggtgctgccgtcacaagtgttcaaattgatggtgttttg
cacgaattctcaaccattgatggtgtaacggaagatgttacccagattattttgaacgta
aaaaagcttgctttgaagttggattcagatgatgataaaacagtcgaaatcgacgtcaaa
ggtccagcaacagtaactgctggtgatattgaagccgacagtgatgttgaagttttgaac
ccagatctttatatttgcactgtcgctagtggtggacatttccacgcacggatgacggtt
cgtaaaggtcgtggctatgtcgctgctgaagataataaggtagacgatatgccgattggt
gttttaccaattgattcgatttataccccgatcagtcgtgttaattatcaagttgagagt
acccgtgttgggcaacgcaatgattatgataagttaacattggatgtttggacggatggt
tctatcaatcctcgagaagccattagtttggcggctaagattttaaccgagcatttggat
atcttcgttaatttgactgatgacgctaaaaacgctgaaatcatggtcgaaaaagaagaa
acgcataaagagaaaatgcttgaaatgacgattgaagagttagatttatcagtacgttca
tacaattgtttgaaacgtgccggtattaatactgttcaagagctcactaataaaactgaa
gccgatatgatgaaagttcgtaacttaggtcgtaagtcacttgaagaagtgaaagctaag
ttagctgatcttggtctttctttgcgtaaagaggactag
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