KEGG   Leishmania braziliensis: LBRM_28_2790
Entry
LBRM_28_2790      CDS       T01113                                 
Name
(RefSeq) putative splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
lbz  Leishmania braziliensis
Pathway
lbz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LBRM_28_2790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbz03041]
    LBRM_28_2790
   03036 Chromosome and associated proteins [BR:lbz03036]
    LBRM_28_2790
Spliceosome [BR:lbz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    LBRM_28_2790
 Complex B
    LBRM_28_2790
 Complex C
   U2 SnRNP specific factors
    LBRM_28_2790
Chromosome and associated proteins [BR:lbz03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    LBRM_28_2790
SSDB
Motif
Pfam: SF3b1 UME RRP12_HEAT HEAT_2 CTD Phage_head_chap DHO_dh
Other DBs
NCBI-GeneID: 5417185
NCBI-ProteinID: XP_001566305
UniProt: A4HGW1
LinkDB
Position
28:1022882..1026067
AA seq 1061 aa
MTDCIPTPTFSTSGISGMGSSTPSNFGTPRMGSSGITAGGSTPLFASGSTPRMGGITPMF
TGATPAAGASFGATPNYQYEGETPLQSHFASSVETQSISTAAIEAKAKMLEKEWRRKNKR
LTSEYLDSILPREFFTVAAVPADYNPLPPEEPNFYEIAVRSMDVFAMQAGGALSGPAAAV
TAGVDANGQPIRYDIPEDMGDGMPAMKVEDAAVFVELLKYHKAEKIPDEHLPSYLLMKNL
FKIKNGDTMQRRAGTRYLLDKASIFGSHFIFQRLSYIWSSDILNIEEKHYFIDFIKSLLQ
QMGKAARQFTKEVIHLVEPLLTAHERILRDDGKQVLTLLTRVVGFQAVFAVIREDFGHAE
SIVRRHTARVMAVVGYAAGTEEVTAALRDMSYSPLALARQTVVRSMAELAKMVGHALIAA
LPEMVAMLERLLRDEKRVQRDAALAVAAIAEATAPDGIEELAPLVDVICEECMKGIGSMA
SPFIQAFGALVPLMSPYDAQARTAAMMPNLVNQFSTPEDEFRRVLISVVRKCVLAEGVTP
HFIRQTIVEPFFEGFWRVRRLAAERQTSGSLVATTVEIAKKLGSVDVLVKLSPDMKDESE
EYQRMVLTAIKKVVDATGMEVAPDTLVTFVLDGAIAAVRQDELGTSKLVMNVLATICNAL
GSRLRPYLKQVFDLIKRRRENREASMRAQTADLVSRIAHTVMLADGAVFLQDLGLSLYER
LEDPDARALSANLRAVRSILAELGSRRFKPSVRELLKRLTFVIKSRNSQVQNGAISLIED
IATNYDTDVDAIHLHQLATRGLFELLDSPQRATRHACARTFGVIAKKIRPFAIILELVDN
FRQDKRQIRICTAVALSAIAKECGPFTIIPYLLNEYRISEGKQVAVIVQHSVLKAIRYIF
EAIGSIGKEYVYPMIPLLERALTETNIQMRRMAVEASRAILLAVAGNDGFEDIALHLLNF
IHPNIVELLAKNEVKIGEERLKMVTAVVSYYEAARVVIEPGKLLQYLLQGLFHPARKVRD
IYRRTYNLIYVGSPESFVPYYPRVESDASHTYVRHELEVLL
NT seq 3186 nt   +upstreamnt  +downstreamnt
atgacggactgtattccaacaccgacattcagcaccagcggcattagtggcatgggcagc
agcacgccttccaacttcggcaccccacgcatgggcagcagtggcattacagccggaggc
agcacacccctcttcgccagcggcagcaccccacgtatgggtgggattacccccatgttc
accggagcaaccccggcggctggggcatcgtttggcgccaccccaaactaccaatacgaa
ggcgagacaccactgcaatcccacttcgcctcttccgtcgagacgcagtctatctcgacg
gcggccatcgaggccaaagcgaagatgctggagaaggagtggcgccgcaagaacaagcgg
ctcacaagcgagtacctggacagcatcttgcctagggagttcttcaccgtggcggcggtg
ccagccgactacaatccgttgccgccggaggagccgaacttttacgaaattgccgtgcgc
tcgatggacgtgttcgcgatgcaggccggcggtgccttgagcggcccagcggcggcggtg
acggccggcgtggacgcgaacgggcagcccatccggtacgacatcccggaggacatgggt
gacggcatgcccgccatgaaggtcgaggacgctgccgtgttcgtcgagctgctcaagtac
cacaaagcggagaagatccctgatgagcatttgccttcctacctccttatgaagaacctc
ttcaagatcaagaacggtgacacaatgcagcgccgcgccggaacgcgttatctcctcgac
aaggcttcgatcttcggcagccactttatcttccagcgtctgagctatatctggagctct
gatatcctcaacattgaggagaagcactatttcatcgacttcatcaagtcactgcttcaa
cagatgggcaaggcggcgcggcagttcaccaaggaggtgatccacctggtggagccgctg
ctcacggcgcacgagcgcattctgcgggacgacggtaaacaggtgctgactttgctgacg
cgggttgtggggtttcaagcagtgttcgcggtaattcgtgaggactttggtcatgccgag
agcatcgtgcgtcgccacacggctcgtgtcatggcggtggttgggtacgcggccggcact
gaggaggtgacggcagcgctgcgcgacatgtcctactctccgctggcccttgctcgtcag
acggtcgtgcgctcgatggcggagctggcgaagatggtgggccacgcgttgattgcagcg
cttccggagatggtggcaatgctggagcgtctgctgcgcgatgagaagcgcgtgcagcgt
gacgcagccttagcggtggcggcgattgcagaggcgacggcgccagacggcattgaggag
ctggcgccgctggtggacgtcatctgcgaggagtgcatgaagggcatcggcagcatggcg
tcgcctttcattcaagccttcggtgccttggtcccactcatgtcaccctacgacgcgcag
gcccgcacggcggcgatgatgccgaaccttgtgaaccagttcagcacccccgaggacgaa
ttccgccgcgttctcatatccgtcgtgcgcaagtgcgtgttggcagagggcgtgacgccg
cattttattcggcagacaatcgtcgagcccttctttgagggcttctggcgtgtgcgtcgc
ctcgccgcagagcgccagacatcagggagtcttgtggcgacgacggtggagattgcgaag
aagctgggcagcgtggatgtgctcgtgaagttgtcgccagatatgaaggatgagagtgag
gaataccagcgcatggtgctgacggccatcaagaaggttgtggacgccaccgggatggag
gtggcccccgacacacttgtcaccttcgtcctcgacggcgccatcgccgccgtgcgccag
gatgagctcggcacgagtaagttggtgatgaacgtgcttgcgactatctgcaacgcactt
gggtcgcggctgcgaccgtacctgaaacaggtgttcgacctcatcaagcggcgccgcgag
aatcgcgaggcctcgatgcgagcacagacggctgacctcgtctcgcgcatcgcccatacc
gtcatgctggcggacggcgccgtattcctccaggacctggggctgagcctctacgagcga
ctcgaggacccggacgcgcgggcgctgagtgcgaacttgcgcgcggtgcgctccatccta
gctgagctgggttcccgccgcttcaagccttcagtgcgcgagctgttgaagcggctcacc
ttcgtcatcaagagccgcaacagtcaggtgcagaacggcgccatttccctgatcgaggac
attgccactaactacgacaccgatgtcgatgcgatccacctgcatcagctggcgacccgt
gggctcttcgaactgctcgactccccgcagcgggcgacacgacacgcgtgcgcgcgcacc
tttggtgtgatcgccaagaagattcgcccctttgccatcatcctggagctggtggacaac
ttccgacaggacaagcgtcagattcgcatttgcactgccgtggccctgagcgccattgcg
aaggagtgcggccccttcaccatcatcccctacctactgaacgagtacaggatcagcgag
gggaagcaggtggcggtcattgtacagcactcggtcctcaaggcgatccgctacattttc
gaggctattggctcgatcggtaaggagtacgtgtacccgatgatcccgctgctggagcga
gccttgacggagacgaatatacagatgcgacgcatggctgtggaggcaagccgcgcgatt
ctgctcgctgtggccggcaacgatggcttcgaagacatcgcgctgcacttactgaacttc
atccacccgaacatcgtggagttattggcaaagaatgaggtcaagattggcgaggagcgc
ctaaagatggtgacggcggtcgtgagctactacgaggcggcgcgggtggtgatcgagccg
gggaagctgctgcagtaccttctgcagggcctgttccatccagcgcgcaaggtacgcgac
atctaccgccgcacatacaacctgatctacgtcggcagcccagagagcttcgtcccgtac
tacccacgcgtggagagcgacgcctcgcatacgtacgtgcgccatgagctggaggtgctc
ctctag

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