Lates calcarifer (barramundi perch): 108872555
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Entry
108872555 CDS
T04895
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108872555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108872555
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108872555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
RhoGEF67_u1
SH3_1
SH3_9
CH
PH
HAUS-augmin3
Mis12
CENP-Q
Motif
Other DBs
NCBI-GeneID:
108872555
NCBI-ProteinID:
XP_018515825
UniProt:
A0A4W6EA31
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Position
LG8:15910993..15934790
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AA seq
773 aa
AA seq
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MNPEEQTVTWLISLGVLSSPKKNIADPEEFLKTSLKDGVVLCKLTERLIPGFTPKYCQDP
RTEADCISNIREFLRGCSSLKVEGFEPEWLYTGENFGKVLTTLLAVNFATQDCAAERSCP
QSGAPSPSQSTSSHTLSSAKSKGSLRRQSKSVEMSENGGGGQLMVKARFNFKQNNEDELS
FSKGELILVTRQEEGGWWEGTLNGKTGWFPSNYVREVKPCEKPVSPKGTPLTKNYYSVVV
QDILEHEREFVKELHTVLSCYLRPLQASDKLSSADSATLCGNLEEILTFQQGLCVALEDC
TKVPEGQQRVAGCYLNLMCQIKTLYLAYCSSHPSAVCILTDHSEELDKFMESQGASAPGI
LTLTSSLSKPFMRFDKYPTLLQELERHVEEAHPDYTDIVKATAAFRSLVTQCQELRKRKN
LELQILSEPVRGWEGDSMKSLGHVAYMSQVHVKNGSSEEKEERYLMLFPNVLVMLSASPR
MSGFIYQGKLPLTGTTVTRHVEDADTAHYAFEITGSMIDRITVFCSSPQELQEWLEHLQP
FSKGGSPAGTISKTVEGKPLSMVGTPTHLSHLGSLSAISRGPLEPPKISKPWSLSCLRPA
PPLKPSAALGYKERMSYIMKDSSKSPRPMKKFLPGNRKKERKPSDDEVQIRKSTAALEED
AQILRVIEAYCTGASLHQTTTAVRKECIPQVLLPEEEKIIVEEMKSNGQTVIEEKSLVDA
VYALKDEVHELKKENKWMKQFLEEEQKSRKELERVVRKLAKQKNDCAWDDGSH
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaggagcagactgtaacgtggttgatatcactaggagtgctcagctcgcct
aagaagaatatagcggacccggaggagtttttgaaaacatcgctcaaggatggggtcgtc
ctgtgcaagctcacggagcggctcatacctggcttcactcccaagtattgccaggatccg
aggactgaagccgactgcatttccaacatcagggagtttttaagaggatgctcatccttg
aaagtggaggggtttgaaccagagtggttatacactggcgagaattttggcaaagtactg
accactttgctggcggtcaactttgccacacaagactgtgctgctgagaggtcatgtccg
cagtctggcgccccctctcctagtcagtcgacgtcttcacacacactctcctctgccaaa
tccaaaggctctctgcgcagacaatccaaatcagtggagatgtctgagaacggcggaggt
gggcagctgatggtgaaggctcgcttcaacttcaaacagaataacgaggatgagctgtcc
ttcagtaaaggtgaattgatccttgtgacgcggcaggaggagggaggatggtgggaggga
actctcaacggcaagacaggctggtttcccagtaactacgtccgggaggtcaaaccctgc
gagaagccagtgtctcctaaaggaactccactgaccaagaactactacagtgtggtggta
caggacatcttggaacatgagcgggagtttgtcaaagaattacatacagtgctgagctgt
tacctacgacccttgcaagccagtgacaagctgagcagtgctgacagcgccaccctgtgt
ggaaacctggaggagatcctcaccttccagcaaggactatgtgtggctttggaagactgc
accaaagtcccagagggccagcagcgagtggcaggctgctatttaaacctgatgtgtcag
atcaagactctgtacctggcttactgttccagccacccttcagctgtctgcatcctcact
gaccacagtgaggaactagacaagttcatggagagccagggagcaagtgctccagggatc
ctgaccctgacctccagtctcagtaagcccttcatgaggttcgacaagtacccgaccctg
ctgcaggagctggagagacatgtggaggaagcccacccagactacactgacattgtaaag
gcaacagctgcatttaggagcctagtgacgcagtgccaggaactgcggaagcgcaaaaac
ctggagctccagatcttgtcggaaccagtgcggggctgggagggggacagcatgaagagt
ctgggtcacgtagcctacatgtcccaggtccacgtgaaaaatgggtccagtgaggaaaaa
gaggagcgctatttaatgcttttccctaatgtgttggtaatgctctctgccagtccccga
atgagtggctttatttatcagggaaaactgccactgacaggcaccacagtaacaagacat
gtagaggatgcagacactgcccactatgcctttgaaatcacaggaagtatgatcgatcgt
attacagtgttctgcagtagtcctcaggagctgcaggagtggctggagcaccttcagccc
ttctccaaaggaggtagccctgcaggcaccatctcaaagactgtagaaggaaagccactg
agcatggtcggcacccctactcacctgtcccacctgggcagcctcagcgccatcagccgt
ggccccctggagccgccaaagatcagcaagccctggtctctcagctgtctgcgtcccgca
cctcccctcaaaccctccgctgccctgggctacaaagagaggatgtcttatatcatgaag
gactccagtaagagcccgcggcccatgaagaagttcctgccgggcaacaggaagaaagag
cggaagccctctgacgacgaggttcaaattaggaaaagcacagccgctctagaggaggat
gctcagatactgagggtgattgaggcgtactgcacaggagccagcctgcaccagaccact
acagcggtgcggaaagagtgcatccctcaggtgcttctgccagaggaagagaagatcatt
gtggaggagatgaagagcaacgggcagacagttattgaggaaaagagcctagttgatgct
gtgtacgctttgaaagatgaggttcacgaactgaaaaaggagaataagtggatgaagcag
tttctggaggaggagcagaagtctcggaaagagctggagagagtggtcagaaaactggcc
aagcagaagaatgattgtgcttgggatgacggcagccactga
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