Lates calcarifer (barramundi perch): 108872649
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Entry
108872649 CDS
T04895
Symbol
hexdc
Name
(RefSeq) hexosaminidase D
KO
K14459
hexosaminidase [EC:
3.2.1.52
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00511
Other glycan degradation
lcf00513
Various types of N-glycan biosynthesis
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
108872649 (hexdc)
00511 Other glycan degradation
108872649 (hexdc)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
108872649 (hexdc)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Motif
Other DBs
NCBI-GeneID:
108872649
NCBI-ProteinID:
XP_018515960
UniProt:
A0A4W6D705
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Position
LG23:complement(1513075..1516732)
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AA seq
480 aa
AA seq
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MKSPPWPKGKKLVHLDLKGAPPRVEYLHKLIELFSQLGVDGLLLEYEDMFPYEGELRLLQ
ATAQPAYSREEVLSVQELARSKGMEVIPLVQTFGHMEFVLKHRAMSGLREMAHCVGTLNP
HREEGVRLVMEMLRQVVELHPGLNTLHIGADEVYMLGEGEESKLWLAAPGRTVEQLFLSH
VTKVARAIKEAWPHMTIVMWDDMMRSMSPDTLKASGLVGLVQPMLWDYTPNLTVDKTVSL
LEKYHSAGMSELWAASSFKGSTSVYTCVPSTQRHVENHLQWLKVAASLSAGIHLKGIAIT
GWQRYDHLSVLCELIPVALPSLAACLQTLLHGQFSAEVQSKVAEKLGVSSVEVEVMERIS
AADPRFPGRRLAEVIVELNAVLNTDDIRFFENNMFVRGWFSPYQRQRRTVTPLITMQIHS
QASEYLTILQQKVEAVREEMVQLYPDSTVQEWIEEHVIPVMAPLQRITEDITACVKEMVP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtccaccatggcccaaaggaaagaaactggtccacctggatttgaaaggcgcc
cccccgagagtggaatacctgcacaaactgatcgagctgttctctcagctgggagtggac
ggcctgctgctggagtacgaggacatgtttccttatgagggggagctgaggctgctgcag
gccacagcacagcctgcgtacagccgagaggaagtgctatctgtgcaggaattagccagg
tctaagggcatggaggtgatcccactggtgcagacgttcggtcacatggagtttgtgtta
aagcatcgggccatgtcgggcctcagagagatggcacactgcgtgggcaccctgaatcca
cacagagaggagggggtgaggctggtgatggagatgctgaggcaggtggtggagctgcac
ccaggtctgaacacactgcacatcggagcggatgaggtgtacatgctgggagagggcgag
gagtcaaagctatggttggcggcacctggacgcacagtggagcagcttttcctgagtcac
gtgactaaggtcgccagggccatcaaggaggcgtggcctcacatgaccatcgtaatgtgg
gatgacatgatgagaagcatgagccccgacacgctgaaagcgagcggtttagtgggcctc
gtccagcccatgttgtgggactacacccctaatctgaccgtggacaagactgtgtctctg
ctggagaagtaccacagcgccggcatgtcagagctgtgggcggccagctccttcaaaggc
tccaccagtgtttacacctgtgtgcccagcacgcagagacacgtggagaaccatctgcag
tggctgaaggtggctgcttcgttatctgcagggatacacctgaagggcatcgccatcaca
ggctggcaaaggtatgaccacctgtcagtgctgtgtgagctgatacctgtggctctccca
tcactcgcagcctgtctgcagacactcctccacggtcagttcagtgctgaggtccaaagc
aaagtggccgagaagctgggtgtttcctcagtggaagtggaggtcatggagaggatatct
gcagccgacccgcgcttcccaggaaggaggctggctgaggtaatcgtggagctcaacgcg
gtgctgaacacagacgacatccgattttttgaaaacaacatgtttgtgagaggatggttc
agcccctaccagcgacagaggaggacggtcactccactcatcaccatgcagatccacagc
caagcatcagaatacttgactatactgcaacagaaggtggaggcagtgagagaggagatg
gtgcagctttacccagattcaacagtccaagagtggatagaggagcatgttatccctgtc
atggctcctctacagaggataacagaggacatcacagcctgtgtgaaggagatggtgcca
tag
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