Lates calcarifer (barramundi perch): 108873916
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Entry
108873916 CDS
T04895
Name
(RefSeq) prothrombin
KO
K01313
coagulation factor II (thrombin) [EC:
3.4.21.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108873916
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108873916
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108873916
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108873916
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108873916
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.5 thrombin
108873916
Peptidases and inhibitors [BR:
lcf01002
]
Serine peptidases
Family S1: chymotrypsin family
108873916
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
108873916
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
108873916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
Thrombin_light
Gla
DUF1986
Motif
Other DBs
NCBI-GeneID:
108873916
NCBI-ProteinID:
XP_018517779
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MVEPASKPAAVLLLFLLHSCLANHVFLSSQRAAQVLVRSRRANQLFEELKPGNLERECVE
EICDHEEAREVFEQPVKTENFWKTYLDCKGTEMSRTRDNINTVRQCIDGQCIFGKGVNYE
GDINITVSGRQCQYWSSSFPHPIIREFNASEPNSNLKENFCRNPDNRPEGPWCFTKDPTV
QKEACSVPRCGEVFVPPTLAPEPVQTGDCLPNYGIDYVGDLDVTLGGHTCLQWSSPRVTA
LSKDKEFIPEVILQGNKCRNPDNDPEGPWCYVEVSGNVTVDFCDLHLCEDQLVGDVLIET
GDTDGRERSVLTPSRKRFFNPRSFGEGEGECGLRPLFEKENKKDAKEEELLESYRGSRIV
GGDKAEVASAPWQVMLYKRSPQELLCGASLISNQWILTAAHCILYPPWNKNFTKDDILVR
LGKHSRTQFEQGVEKIVAIDDIIVHPKYNWKENLNRDIALLHLRRPVPFTNEIFPVCLPN
RKVAQDLMSEGYKGRVTGWGNLKETWNPAARNLPSVLQQIHLPIVDQDTCRGSTSVRITD
NMFCAGYKPEDTKRGDACEGDSGGPFVMKYPAENRWYQMGIVSWGEGCDRDGKYGFYTHV
YRMSRWMRKVIDKAGGDED
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagcatcgaaaccagccgccgttctgctgctgtttctgctgcacagctgc
ctggcaaaccatgttttcctcagcagtcagcgggccgctcaggtcctggtccgaagccga
cgggccaatcagctgtttgaggagttgaagccagggaacctggagagagagtgtgtggag
gagatctgtgaccatgaagaagccagagaggtgttcgaacagccggttaaaacagaaaac
ttctggaaaacgtacctggactgtaaaggaactgaaatgtcaagaacacgggacaacatc
aacactgtcagacagtgtatagatggtcagtgtatttttggtaagggggtgaactatgaa
ggagacatcaacatcacagtatcagggagacagtgtcagtactggagcagcagcttccca
catcccatcatcagggagtttaatgcctcagagccgaacagtaacctgaaggagaacttc
tgtcgaaaccctgacaaccgtcctgagggaccctggtgtttcaccaaggacccaacagtc
cagaaagaggcctgcagtgtccccagatgtggtgaggtctttgtcccgcccactctggcc
cccgaaccggtccaaactggtgactgtttaccaaactacggcatagactacgtaggcgac
ttggatgtcaccctgggaggccacacctgtctgcagtggtcatcgccgcgggtcacggcc
ctcagcaaggacaaggagttcatacctgaggtcatcctgcagggcaacaagtgccgtaac
cccgacaacgaccccgagggcccctggtgctacgtggaggtttctggaaacgtgacggtc
gacttctgtgacctgcatctctgtgaggatcagttggtcggtgatgtgctgatagagacc
ggagacactgatggccgggagcgctccgtcctgactccaagcaggaaacggtttttcaat
cctcgcagctttggagagggagagggagaatgtggactgcgccccctgtttgaaaaggag
aataaaaaggatgcgaaggaggaggagctgttggagtcgtacagaggcagtcgcatcgtt
ggaggcgacaaagcagaggtggcctcagcaccatggcaggtgatgttgtacaaacgcagc
cctcaggagctgctgtgtggagccagtctgatcagtaatcagtggatcctcactgcagct
cactgcatcctctacccaccctggaacaagaacttcaccaaagacgacattctggtccgc
ctgggaaaacacagcaggacccagtttgagcaaggcgttgagaagatcgtggcgattgat
gatatcatcgtccatcctaagtacaactggaaagaaaacctgaacagagacatcgccctg
ctgcacttgagacgaccggtcccgttcaccaatgagatcttccccgtctgccttcccaac
aggaaggtcgctcaggatctcatgtccgagggctataagggccgagtgactggttggggt
aacctgaaggagacctggaacccagcagcaagaaatttaccttcagtcctccagcaaatc
caccttccaatcgtggaccaggacacctgtcgtggatccacatcagtcaggatcacagac
aacatgttctgtgctggttataaacctgaagacaccaagagaggtgacgcctgtgaggga
gacagcggtggaccgtttgtgatgaagtatccggcagaaaaccgctggtatcagatgggt
atcgtgtcgtggggcgagggctgcgaccgtgacgggaagtatggcttctacacccacgtg
tacaggatgagccggtggatgaggaaagttattgacaaggcgggaggagacgaagactaa
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