Lates calcarifer (barramundi perch): 108875919
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Entry
108875919 CDS
T04895
Name
(RefSeq) sialidase-3-like
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00511
Other glycan degradation
lcf00600
Sphingolipid metabolism
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108875919
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108875919
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
108875919
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Gene cluster
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Motif
Pfam:
BNR_2
BNR_3
BNR
Sortilin-Vps10
Motif
Other DBs
NCBI-GeneID:
108875919
NCBI-ProteinID:
XP_018520644
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Position
LG5:complement(16983346..16985046)
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AA seq
399 aa
AA seq
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MDNIQTKTVDVFKSVVYRIPALFYDRNSETLLAFAEQRETADDASTKNLVMSRGTLKDES
SGAKTIEWSEFKIVEKAKLDNYRPMNPCPVFEKNTNTLFLFFICVEDGVTEQWQIKNCTN
KARLCYITSTDLGQTWSEEGVTELTDKLDEIKNWKTFAVGPGHGLQMKKGRLIVPVHAYA
CVCAPCSSCCCYITCMCSCTCSAPNALALYSDDRGSTWKLGKMFQSQSGECQMAEIFDGD
KSSIYCNARSQGCCRVEAVSENGGADFHTLSNATKLVETHSGCQGSVVSFPAQDEGAEGD
PKWLLYTHPCDPCKRFNLGVYVNKSPKDPSKWSKPWIINSGPSGYSDLAYIGNGWFACLV
ECGVKKETEQIASVVFSYDDIKQSTTMQCIMSCQCFKCP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatacagacgaaaactgtggatgtctttaaatctgttgtgtacaggattcct
gctcttttctacgacagaaacagtgaaactcttctagcttttgcagagcagagggagact
gcagatgatgccagtacaaagaacctggttatgagtagaggaacgctgaaggatgaatcc
tctggtgcaaagacaattgagtggtcggagttcaaaatagtggaaaaggcaaaacttgac
aactaccgtcctatgaacccctgcccagtgtttgagaagaacaccaacacacttttcctg
tttttcatctgcgttgaggatggtgtgacagagcaatggcagataaaaaactgcaccaac
aaggcccgtctctgctacatcacaagcactgatcttggacaaacctggagtgaagaaggt
gtgacagagttgacagacaaactggacgaaattaagaactggaaaacatttgctgttggg
ccaggccatggtcttcaaatgaagaagggtagattgattgttcctgttcatgcttatgct
tgtgtttgtgctccctgctcttcctgctgttgttacataacgtgtatgtgttcgtgtacg
tgctctgctccgaatgctcttgccctgtacagcgatgataggggcagcacatggaagtta
ggcaaaatgtttcaatcacaatcaggggaatgtcaaatggcagagatttttgatggagac
aaaagctccatctactgcaatgctcgtagtcagggatgctgtcgagtggaagctgtcagt
gaaaatggtggagctgattttcacacattgagcaatgctacaaagcttgttgaaactcat
tcaggttgtcagggaagtgtggtctcatttccagctcaagatgaaggtgcagagggtgac
ccaaagtggctgctctacactcacccatgtgatccgtgcaaaagatttaatttaggagtg
tatgtgaacaaatccccaaaggatccaagtaagtggagcaaaccctggatcattaacagt
ggacccagtggttactcagacctggcttacattggtaatggttggtttgcatgtctggtg
gagtgtggggtgaagaaagaaacagagcagatagcctctgtggtttttagctacgatgac
atcaagcaatccactacaatgcaatgtataatgtcatgtcagtgttttaaatgtccgtaa
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