KEGG   Lates calcarifer (barramundi perch): 108876193Help
Entry
108876193         CDS       T04895                                 

Gene name
wbscr17
Definition
(RefSeq) putative polypeptide N-acetylgalactosaminyltransferase-like protein 3 isoform X1
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00512  Mucin type O-glycan biosynthesis
lcf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    108876193 (wbscr17)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:lcf01003]
    108876193 (wbscr17)
Enzymes [BR:lcf01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     108876193 (wbscr17)
Glycosyltransferases [BR:lcf01003]
 O-Glycan biosynthesis
  Mucin-type
   108876193 (wbscr17)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID: 108876193
NCBI-ProteinID: XP_018521052
LinkDB All DBs
Position
Unknown
AA seq 599 aa AA seqDB search
MAFVFRRWRVLLVLNVLAVAGFMTFWAKCNTRSVQAAGPEAPADGKRPRGNGTAQGSSIS
HEVLLKRLSSLEDVVYRQLNGLSKSLGLIEGFGGRGKGGLPATLSPAEESDAKYLREKYG
YNAYLSDRISLDRTIPDHRPSKCRKVSYPRDLPQISLIFIFVNEALSVILRSVHSAVNHT
PAHLLKDIILVDDNSDDEQLKGPLEEYVNKRYPGLVKIVRNQKREGLIRARIEGWKVATA
EVTGFFDAHVEFTPSWAEPVLARIKDDHKRIILPSIDNIKHDTFEVERYENSGHGYNWEL
WCMYINPPKQWWDEGDMSAPIRTPAMIGCSFVANRDYFGELGLLDSGMDVYGGENIELGI
RVWLCGGSMEVLPCSRVAHIARIKKPYHSNIAFHTRRNALRVAEVWMDEYKSNVYLAWNI
PMENHGIDYGDISQRVALRKSLQCKSFEWYLDNVYPEMRRYNNTLFYGEIRNSKVSHLCM
DQGMKENHTATLHPCHGWGPQLGRYTKEGQLFLGPLGSTGEDTRCVVDDQMSSFPQLLNC
DKVTNVKQKTWHFSQNESIINRATGRCLEVVPANVYFGHLLVLQPCSGQRWTIKNTMKQ
NT seq 1800 nt NT seq  +upstreamnt  +downstreamnt
atggcttttgtgttcagaagatggagggttttactggtgctgaacgtgcttgctgttgcc
gggttcatgactttttgggccaagtgcaacacacgcagcgtccaagccgccggtccggag
gctccggctgacgggaagaggccccggggcaacgggacggcacaggggtccagcatcagc
catgaagtactgctgaagaggctcagctccctggaggacgtggtgtacaggcagttgaac
ggtctgtccaaatccctgggcctgattgagggcttcgggggtcggggtaaaggcggccta
cctgccacgctgtctccggctgaggagagcgatgccaaatacctgagggagaagtatggc
tacaacgcatacctcagtgacagaatctctctggatcggaccataccagaccaccggccc
agcaaatgcagaaaggtcagctacccaagagacctcccccagatctccctcatcttcatc
ttcgtcaacgaggctctgtccgtgatcctgcgctcagtccattcggctgtcaatcacacg
ccggctcatttgctcaaagacatcatcctggtggatgacaacagtgatgacgagcagctg
aaaggaccgctggaggaatatgtgaacaagcgctaccccggcctggtgaagatcgtcagg
aaccaaaagagagagggactgatccgggccagaatcgagggctggaaggtggccactgcc
gaggtgacgggattttttgatgcccacgtggagttcacaccatcctgggccgagccagtt
ctggccagaataaaagatgaccacaagaggatcattctgccctccatcgacaacatcaag
catgacacattcgaggtggagcgctacgagaactcgggccatggctacaactgggagctg
tggtgcatgtacatcaatccaccaaaacaatggtgggacgagggggacatgtctgctccc
atcaggactcccgccatgattggctgctccttcgtggctaaccgcgattactttggcgag
ctcggcctgctcgactcaggcatggatgtctatggaggggagaacatcgaattgggcatc
agggtgtggctgtgtggaggtagtatggaagtgctgccttgttccagggtggctcacatt
gcacggatcaagaaaccctaccacagtaacatagctttccacacacggcgcaatgctctt
cgcgtggctgaggtctggatggatgagtacaaatccaatgtctacttggcctggaacatc
ccaatggagaaccacggtattgattacggagacatctctcagagggttgccctgaggaag
agtctgcagtgtaagagctttgagtggtacctcgacaacgtttacccagagatgaggagg
tacaacaacacgctgttctatggcgagattcgtaactctaaagtgagccatctgtgtatg
gatcagggcatgaaggagaaccacacggccaccctgcatccatgtcatggatggggtcct
cagctgggacgttataccaaagagggtcagctgttcctgggccctctgggcagcaccggg
gaggacactcgctgtgtggtggacgatcagatgagcagctttcctcaactcctcaactgt
gacaaagtgaccaatgtgaagcagaagacgtggcatttctctcagaatgaatcgatcata
aatcgagccacgggacgctgtctggaggtggtgccggctaacgtttactttggccacctg
ctggtcctgcagccctgctccgggcagaggtggacaatcaagaacaccatgaagcagtag

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