Lates calcarifer (barramundi perch): 108876859
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Entry
108876859 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: neurabin-1
KO
K17551
neurabin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108876859
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108876859
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108876859
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108876859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ_5
SAM_2
PDZ
SAM_1
PDZ_6
PDZ_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
108876859
NCBI-ProteinID:
XP_050921715
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All DBs
Position
LG3:complement(8954856..9000465)
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AA seq
1148 aa
AA seq
DB search
MLKTEAXGERTSLRSASPHRNAYRAEFQALKKAFDQPRIDGDSKPKDLERVKQPRGRQYG
THVSRIKDMFMQMGSENAAAKTRGRDDSSPQKLVKPTNFINKADGSVIKLQHSSSAERIG
GAGAKFSETRKLFEQQSRDQSQSPVFPYGRDKRGSHEHLDDWRGARSNRGSTDSLDSLCS
RTEASSPTVSQLSAVFENADHHNQGVPYRGVNRRALYSPDGFHRHGGDLSEDDSRQSPVR
GNYRSRIGGKFPTSSSSEDLLSPSPGAETTELKPVSREEEAQDKADQVETTGGDRRHLSG
ATTNGSQVNGSCEEEEKPSETRKHTEDLGVSKASKPADDAVITNKAFKDDTPELLPTPAT
PAESQEDGDGSREDKPSESPNDQVENPDEEYTGNERVVFNADGDACYQGWGESCTDPEDD
LYGDDEDIVYDPGSDLTEIPGLPEENKEDIPPKRKIRFSSAPITVFNTYSNEDYDRRNEE
VDPVASSAEYELEKRVEKLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVIE
GGAAERDGRIKVNDQIVEVDGTSLVGVTQSFAASVLRNTSGVVRFVIGRERPGQQSEVAT
LIQQTLEQERRQRELLEQQYAHYDADDDEQTGEYATDEEETGDTVAGGEKSIEVFDLPET
EDILSPSELDATKLYQKFRELQIKHTVTEAEIQKLKNKLTSVEREKQRWEKEKSQLKASI
EENKERMLKLESYWIEAQTLCHTVNEHLKEAQAQYQALEKKYNKAKKLIKDFQQKEVEFI
QKEDAERRRLEEAEKAHLAEIQGLQVRIAALESELMQLMKQNGIQVNNNNSNSAQHHSPS
RAAAQARELREGSPYSPSKKKSYRGVTRDSISSTEGEVSEGHGSPSHSRSSSIRSVASCD
GGGAAVLRASCSAENSPRRTVPPPSTQDGCQSPAMSSPSHSLDEHRQALDAGSAEPSAED
SPEKLKAKTSLTWPHFFSYSYYLGPTLNDDLSASSSSSAEISGLLSEAKMSGRSHTLVLS
SNESLDMIDDEILDEGQFSKQYQWQNCSIPEWTSQQVARWLMGLNLEHHIPEFTAKNIDG
EQLLQLDSTELKALGVTSSQERALIKKKIKDLKVLMEKAKRNREKVEKQREKLRKRELEQ
QQKENAAE
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagacggaggccntcggggagaggaccagcctccggagtgcctccccccaccgt
aatgcctaccgggctgagtttcaggcgctcaagaaggcctttgaccagcctcggatcgat
ggagattcaaagcccaaagacctagaacgggtgaaacaaccgaggggtcgccagtatggc
acccacgtcagccgcattaaggacatgttcatgcagatgggctctgaaaatgcagcagct
aagacaaggggtcgagatgattcttcgccacaaaagctggtcaagcccactaacttcatc
aacaaggctgacggatcagtgataaaactccagcattcctcgtcggcggaaaggatcgga
ggtgctggagcaaagttctctgaaaccaggaagctgtttgagcagcagtcacgtgaccag
tcccaatcaccagtctttccctatggacgtgataaaagagggtcccatgagcacctcgat
gactggcgaggggcaagatccaatcgaggcagtacagactccttggactcactttgctcc
agaacagaagcatcctcaccgactgtcagtcaactcagtgctgtttttgaaaatgccgac
caccacaaccagggtgtgccctacagaggagtcaacagacgagccctctactcaccagac
ggatttcaccgccatggaggtgatctcagcgaggatgattcacgacagtctcctgttcgt
ggaaactaccggagcaggataggtggaaaatttcccacatcctcgtcctctgaggacctc
ctgagcccaagtcctggggcagaaacaacggagctgaaaccagtttcacgagaggaggaa
gcccaagataaagcagaccaggttgagaccacaggtggagatcgacggcacctttctggg
gccaccactaatggaagccaggtcaatggttcatgtgaagaagaggagaaaccttcagaa
acaagaaaacatactgaggatctaggggtgtccaaagcttcgaaacctgcagatgatgct
gtgattactaacaaagctttcaaagatgacactccagagctcctgccaaccccagctacg
ccagctgaaagccaggaggatggagatggttcaagagaagacaagccctctgaatccccc
aatgaccaggtggaaaatcctgatgaggaatacactgggaatgagcgggtggtttttaac
gcagacggggacgcctgttaccagggttggggtgaaagctgcacagatcctgaggatgac
ctctacggcgacgatgaggatattgtctacgacccgggctctgatctgacagagattcct
ggtctgccagaagaaaacaaagaggacatccccccaaagagaaagattcgcttcagttct
gctcccattacggtcttcaacacctactccaacgaggactatgatcgacgtaatgaggag
gtggatcctgtggcctcctccgcagagtatgagctggagaagagggtggagaaattggag
cttttccctgtggagctggagaaagatgaggatggcctggggatcagtatcatcgggatg
ggtgtcggtgctgacgcaggcctggagaagctgggcatcttcgtcaagaccgtcatagag
ggtggagctgctgagagagatggcaggataaaggtgaacgaccagatcgtagaggtggat
gggaccagtctggtgggcgtcacccagagcttcgctgcctccgtcctcaggaacacatca
ggagtggttcggtttgtgattggccgagagcgcccgggccagcagagcgaggtggccact
ctgatccagcagaccctggagcaggagaggagacagagagagctgctggagcagcagtac
gcccactatgacgctgatgatgacgagcagacaggagagtatgccacagatgaagaggaa
accggggacacggtggcgggcggagagaagagcatcgaggtgtttgacttgccggagaca
gaagacatcttgtctccctcggagttagatgccactaaactctaccagaagttcagagag
ctccagatcaaacacacagtgactgaggccgagatccagaagcttaaaaacaagttgaca
tcagtggagagggagaagcaacgctgggagaaggagaagagccagctgaaggccagcatc
gaggagaacaaggagaggatgttgaagctggagagctactggatcgaggcgcagaccctc
tgccacaccgtcaacgaacacctgaaggaggcccaggcccagtaccaagctctagagaag
aagtacaacaaagccaagaaactcatcaaagacttccagcagaaagaggtggagtttatc
caaaaggaggatgcagagaggaggcggctggaggaggctgagaaagctcacctggctgag
atccagggactgcaagtcaggattgcagcattagagtccgagctaatgcagctgatgaag
cagaacggcatccaggtcaacaacaacaacagcaacagtgctcagcatcatagccctagc
agggctgcagcacaagccagagaactgagggagggctctccctactcacccagcaaaaag
aagagctatagaggagtcacccgtgacagcatcagctctacagagggagaggtatcagag
ggacacggcagtccttctcacagtcgttccagttcgattcgtagcgtggcctcatgtgat
ggaggaggagctgcagtgctcagggcttcctgcagtgcagaaaactcccccagacgaact
gtgcccccaccatccacccaggatggttgtcagtctcctgcaatgtcgagcccttctcac
agtctggacgagcacagacaagctctggacgctggctccgcagagccgtcagcagaggac
agtccagagaaactcaaggccaagacctctcttacatggccccacttcttctcctattca
tattacttgggacccactttgaacgacgatctgagcgccagcagcagcagctcagcggag
atcagtggtctgctgagtgaagccaagatgtctggacgctcacacaccctggtgctgtcc
tcaaacgagagtctggatatgatagatgatgagatcctagacgagggacagttttcaaag
cagtatcagtggcaaaactgcagcattccagagtggacctcccagcaagtggcccgctgg
ctcatgggcctcaacttagaacaccatatcccagaattcactgccaaaaatatagatgga
gaacagctgctacagctggatagcactgagctaaaggcccttggagtcacttcttcacag
gaacgtgccctgatcaagaagaagatcaaagaccttaaagtcctgatggagaaggccaag
aggaaccgtgagaaggtggagaaacagcgcgagaagctacgaaagagagagctggagcag
cagcagaaagaaaacgcggcagagtga
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integrated database retrieval system
