Lates calcarifer (barramundi perch): 108877897
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Entry
108877897 CDS
T04895
Name
(RefSeq) paired box protein Pax-5
KO
K09383
paired box protein 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108877897
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108877897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
HTH_28
MarR_2
Motif
Other DBs
NCBI-GeneID:
108877897
NCBI-ProteinID:
XP_050928562
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Position
LG8:complement(13016872..13019535)
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AA seq
247 aa
AA seq
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MLSARLNVGRTVRMSFNWCSFDSLRCSGHGGVNQLGGVFINGRPLPHVVRQRIVELAQLG
VRPCEISRRLRVSHGCVSKILARYNETGSIRPGVIGGSKPKVATPKVVQMILHLKHTNPT
MFAWEIRDRLVLERVCDHDSVPSISSINRIIRNKGQSESCEVVASASSVAVGTAHSSEST
YSIRGILGIRKHSGKYKEVRDVSCGVYHDQPCSCNDTWGRCDPCLTSISSLTFYPSLPAN
HNPGLTG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcgcgcgcttaaatgttggtagaactgtacgtatgtcttttaattggtgttcc
tttgattcgctccggtgctcagggcacggcggcgtaaaccagctcggcggagtcttcatt
aacgggcgcccgttaccgcacgtggtgagacagcgtattgtggagctcgcgcaactgggc
gtgcgtccctgtgagatctcccgccgcctgcgcgtcagtcacggctgtgtcagcaaaata
ctggccaggtacaatgagacagggagcatcagaccaggagtgattggaggctccaagcca
aaagtggccactcctaaagttgtgcaaatgatcctgcatctgaaacacaccaaccccacc
atgttcgcctgggagatcagagacaggctggtgctggagcgagtgtgtgaccatgacagc
gtgcccagcatcagctccatcaacaggatcatcagaaataaaggccagtctgagtcttgt
gaagttgtggcatcagcatcatctgttgccgtgggaacagcccattcctcagagtcgacc
tattccatccgtgggattctggggatcagaaaacacagcggcaaatataaagaagtcagg
gacgtctcctgcggcgtgtaccacgatcagccatgttcctgtaatgacacctggggacgg
tgtgacccctgcctgacctctatctccagcctgaccttttaccccagcctgccagctaat
cataatccaggtctgacaggatga
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