Lates calcarifer (barramundi perch): 108880780
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Entry
108880780 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: tectonin beta-propeller repeat-containing protein 1
KO
K17988
tectonin beta-propeller repeat-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108880780
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108880780
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108880780
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
108880780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hyd_WA
Tectonin
Pex24p
PH
Motif
Other DBs
NCBI-GeneID:
108880780
NCBI-ProteinID:
XP_018527997
LinkDB
All DBs
Position
LG23:4576540..4588205
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AA seq
1214 aa
AA seq
DB search
MPVSLLWAVDVYGRVYSLSTAGQQWEHCHDAQMEFKRVTAAQQCCWGIACDNNIYLNVHA
SDLPVRYQEETYENQRWNPVDGFSERLLPSDRWQWSDVTGLQHQPLDSFRLPSDSWEWEA
DWYIDENFEGEPTEKGGWTYAIDFPATYTKDKKWNSCVRRRRWLRYRRYKAMDTWSKIPS
QQTTLPDPFSDISCGGWEISEEPRGRLSLWAVSLQGKVWFREGIYHQNPEGSLWEEVSLP
GEVVQISCGPGDLVWAALWEGQLIVREGIGRDCPKGTSWAVVDSPSPDVGAIHVAVGVNV
VWAVTKDNKVWFRRGVNSHNPCGSGWISMVGEMIMVNVGLNDQVWGISCEDRAVYFRQGV
TSSELSGKTWKVISVPRDGDRSHSSASANSLQSAGYYFSGEVRAQSVVSDVESDTEKGST
DGPACLVTSASPESFVDAPTDHTSDQPTDTPKARIPKVTSDSFISELVSDREPAKTIRDV
GSAAPAVLEEETIPGEGEVKAPCTDSSLSPTQSGGLLDPQWSNVDLEEAQGQQAQTAADA
ESADTCSLSSVATYTLAMEDPYGADEHPLWAWVSGGGCSVDTHSQLNWFNCTMNTSSLVQ
SVQSMSLSVTPAQTAAWRRQIFEQLSERTKREMDNFRHYEQAIEQSVWVKKGTMQWWRDW
KPHKWIDVHFALEQFSGPEGNKDGILFIYYNFYEEKKYLHAFINEVTILVPVLNDSKHTF
AIYTPERTKQRWPIRLAAATELEMHDWLALLSVSCCDSRGIQGPPSKQAIWSITCKGDIF
VSEPSPALEAMPYPTPCDQMFWRQVGGHLRTVECNSVGIVWGIGYDHTAWVYTGGYGGGF
FQGLASSTDNIYTQTDVKSVYIYENQRWNPVTGYTNRGLPTDRYMWSDASGLHECTKTNT
KPPSPQWTWVSDWAIDYSVSGGTDREGWQYAADFPASYHGYKTMKDFVRRRRWARKCKLN
TTGPWQEIPPIPLSDVTILPCAAQSSVDVVPLWAISNKGDVLCRLGVTTLTPAGSSWLHV
GTDQPFKSISIGAASQVWAIAKDSSAFYRGSVSPQSPAGDCWYHIPSPAKQKLKQVSVGR
TSVYTVDENGNLWYRQGVTPSYPQGSSWEHISNNVRKVSVGPLDQVWIIADKVQGSHSLS
CGTVCHRLGVQPMEPKGQSWDYGIGGGWDHITVRGNSMEPPRICLPSLTDPSAPAPRSPL
LARSGEVNSNAVGC
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctccctgctgtgggcggtggatgtgtacgggcgggtctacagcctgtccacg
gcgggccagcagtgggagcattgccatgacgcccagatggagttcaagcgggtgacggcg
gctcagcagtgctgctggggcatcgcctgcgacaataacatctacctgaacgtccacgct
tctgatctgcccgtccgctaccaggaggagacctacgagaaccaacgatggaatcctgtc
gatggtttctcggagcgtttgttgccaagcgaccgctggcagtggagtgatgtcacgggt
ctgcaacaccagcctctggacagttttcgacttccctctgacagctgggagtgggaggcc
gactggtacattgatgaaaactttgagggagagcccacagagaaagggggatggacctat
gccatcgacttccccgccacctacaccaaagacaagaagtggaactcctgtgtccgtcgc
aggcgatggcttcgctacaggaggtacaaagccatggacacctggtctaagatcccctcg
cagcagacgactctaccagatcccttcagcgacatcagctgtggaggctgggagatcagt
gaggagcccaggggccggctgtcactgtgggcagtgtccctgcagggcaaggtgtggttc
agggagggaatctatcaccaaaaccctgagggctctttgtgggaggaggtgtctctcccc
ggggaggtagtccagatcagctgtggcccaggggacctggtatgggcggcgctgtgggag
gggcagctcattgtcagggagggcattggccgagattgccccaaaggtacctcctgggct
gtggtggactctcccagtcctgatgtgggagccatacatgtagccgtgggagtcaatgtg
gtttgggctgtgaccaaagataataaagtgtggttcagacgtggcgtgaactctcacaac
ccctgtggctctggctggatcagcatggttggagaaatgatcatggtcaacgtaggactc
aacgaccaggtgtggggtatcagttgcgaggaccgggcggtgtacttcagacagggtgtg
acctccagtgaactgagcgggaaaacctggaaggttatcagcgttccccgagatggagat
cgatctcactccagtgccagcgcaaacagcctgcagagtgctggatattacttcagtggt
gaggtgcgtgctcagtcagtggtgagtgatgtggaatcagacacggagaaaggatctaca
gatggacccgcctgcctcgtcacctctgcctccccagagtcctttgttgatgccccgaca
gatcacacctctgaccagcccactgacacccccaaagcccgcatccccaaagtcaccagc
gacagcttcatctccgaactcgtctctgatcgagagcccgcaaagaccataagagatgtc
ggatctgccgctcctgctgttctggaggaggagaccatccccggagagggagaggtcaaa
gctccctgcaccgacagtagcctttcccccactcagtcaggaggtctcctcgacccccag
tggagtaacgtggacctggaggaggcgcagggtcagcaggctcagactgcagcggatgct
gaatcagcagatacttgcagcctgtcatcggtggctacatacacccttgccatggaggat
ccatatggggcagatgagcaccctctgtgggcgtgggtcagtggaggaggctgctctgtg
gacactcactcccaactcaactggttcaactgcactatgaacacttcatctctggttcag
tcagtccagtccatgagtctgtctgtgaccccagcccagacggcagcctggcggagacaa
atctttgaacaactcagtgagaggaccaagagagagatggataatttcagacattacgaa
caagccatagagcagtctgtgtgggtgaagaaggggaccatgcagtggtggagagactgg
aagccacacaagtggatagatgttcattttgccttggagcagttctcaggaccagagggc
aacaaggacggcatccttttcatctactacaacttctatgaggagaagaagtacctgcat
gccttcatcaatgaggtcacaatcctggttcctgtactaaatgactccaaacacactttt
gccatctacactcctgagcggaccaaacagaggtggccaatcagactggctgcggccact
gagctggaaatgcatgactggctggcattgttgagtgtgtcatgctgcgactccaggggg
atccagggtcctccctctaagcaggccatctggtccatcacctgtaaaggagacatcttt
gtcagtgagccctctcctgctctggaggccatgccttaccccacaccctgcgaccagatg
ttctggcggcaggttggaggtcacctgcgcacggtggagtgtaacagcgttgggatagtg
tgggggatcggctatgaccacactgcctgggtctacaccgggggctacggagggggcttc
ttccagggactggccagcagcacagataacatttacacacagactgacgtcaagagtgtc
tacatctacgagaaccagaggtggaaccccgtcacaggctacaccaacagaggtctacct
acagaccgctacatgtggagcgatgcatcaggactacacgagtgcacaaaaacaaatacc
aaacctccctcacctcagtggacatgggtgtctgactgggccatcgactacagcgtctca
ggagggacagacagagagggctggcaatatgcagctgattttccagcgtcgtatcatggc
tataaaaccatgaaggactttgttcgtcgcaggcgatgggccaggaagtgtaaactgaac
actacaggaccctggcaagaaatcccacccatcccactgagtgacgtgaccatcctgccg
tgtgccgctcagagcagcgtggacgtggttcctctgtgggcgatcagcaacaagggagac
gtactctgccgactgggagtcaccacactgacacctgctggatcctcatggctccatgtg
ggaactgaccagcctttcaagtccatctccattggtgctgccagccaggtttgggccatt
gcaaaagacagctctgccttttatagaggatctgtctctcctcagagccctgcaggagac
tgttggtaccacatcccctccccagccaagcagaagctgaagcaggtgtctgttgggagg
acatcagtctacactgtagatgaaaatggtaacttatggtacaggcagggtgtgaccccc
agctaccctcagggctcctcctgggaacacatctctaataatgtacgcaaggtctctgta
gggcctctggaccaggtgtggatcatagcagacaaggtgcagggcagccacagtctgagc
tgtggcacagtgtgccatcgactcggagtccaacccatggagcccaaagggcagtcgtgg
gactacggcattgggggtggatgggatcacatcacggtgagagggaactccatggagccg
ccccgcatctgtcttccctctctaacagacccgtctgccccggcccctcggagccccctc
ctggccaggagcggggaggtcaacagcaatgctgtgggatgctag
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