Lates calcarifer (barramundi perch): 108881398
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Entry
108881398 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: scaffold attachment factor B1
KO
K25092
scaffold attachment factor B
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108881398
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108881398
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GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
108881398
NCBI-ProteinID:
XP_018528912
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All DBs
Position
LG17:11937661..11946570
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AA seq
832 aa
AA seq
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MADPSADVEVPEGAEVRKLSELRVIDLKAELKKRSLDTTGVKSVLSERLKKAIEEEGGNP
DEIIVVPDSAPKKASSTPKRAARDTRQDNDEPEDSTIEEDSRDGHEDLQDDHENMQEMDI
LDMNVLDETENDNGIPAEDDEDYPENFHGEDDAEMNDEHDSRGFDSEDEARGPEMDESEM
LDKDEYMTCSSINMGQDPGADDLKEETENDKVAGSCLAEPLNEDRHQSHETSPEEEQAAT
AGGEDSVSDTGAKYDKAASGDGESNRDVVEGDTKEVGDSQNVPEETFDAENKSSQAVSVS
EQGAVGETVDSEIGSKKGEEDEKTEEKAAADSASTVKESSSVEGDDQKKSAEEKDGKTES
KDEKAAGSAAASSSRNLWVSGLSSTTRATDLKTLFSKYGKVVGAKVVTNAKSPGARCYGF
VTMSSTEEATKCISHLHRTELHGRMISVERAKNEPAGKKPADKNDTKKSGGDRRHSSDSK
SDGKDEKSEEGKDGKVRNERTVVMDKSKGEPVISVKTKSKERSTKSRDRKSSSKEKKDIL
SFDQIKEQRERERQRQREREIREVERRRYTDRDRERDNRPDRERERIRLFREREERKHLM
RKRHWLEAEKQRLDADRMERQFLERERLRIEYERRREQERILREREELRRQQEQLRYEQE
RRPIKRPYDMDGRKDDWPEKRMAMDDRYGRTDFGRQERYQDFDHRDRGRYQDDMMMDRRD
NARGMGADRDGQHFSDRSDRHGRDWGGGYDKRMNPREGGRDWESGRKMEGDRAWQSRDGA
IPGQSHMARGGMAGRGGYMNTGTSQSLSGALNRQNQLMQGGGLQGGAFGRRY
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccatcagcggacgtggaggtgccagagggcgcagaggttcgcaaactgtcg
gagctgagagttatcgatctgaaggccgagctgaagaaacgaagcctggacaccacgggc
gtcaagagtgtgctgtccgagcgtttgaaaaaggccattgaggaggagggtggaaatcct
gatgagattattgtggttccggattcagccccaaagaaagctagctcaacacctaaacgg
gctgccagagataccagacaagacaatgatgaaccagaggacagcactattgaagaggac
tcccgtgatggacatgaggatctgcaggatgatcatgagaacatgcaggaaatggacatc
ctcgacatgaacgtgctggatgagaccgagaatgacaatggaataccagctgaggatgat
gaggattatccagagaatttccacggagaagacgacgcagaaatgaatgatgaacatgac
agcaggggtttcgattcagaggatgaagcaagaggcccagagatggatgagtctgagatg
ctagataaggatgaatatatgacatgctcatcaatcaatatgggtcaggatccaggtgca
gacgacctcaaagaagaaacagaaaatgacaaagtagccgggtcttgtttagctgagccg
cttaacgaagatcgccaccagagccacgagacgagccctgaagaagagcaagccgccacc
gccggaggggaagacagtgtgtccgacactggtgccaagtacgacaaagctgcctctggg
gatggggagagcaacagggatgttgtggagggtgacaccaaagaggttggggactcacag
aatgtcccagaagagacatttgacgctgaaaacaaaagctcgcaggctgttagtgtaagt
gaacagggcgctgtgggtgagaccgttgattcagaaattgggtctaagaagggtgaggaa
gatgagaagacagaagagaaagccgctgcggattcagcctcgacagtgaaagagtcctct
tctgtagagggcgatgatcagaaaaagagcgctgaggaaaaagatggcaagaccgagtca
aaagatgaaaaggccgctggaagtgctgcagcaagcagtagcaggaacctgtgggtcagc
ggtctctcctccactaccagagcgactgatctgaagaccctcttcagcaaatatggcaag
gttgtcggagctaaggtggtgaccaatgccaagagccccggcgctcgctgctatggtttt
gtcaccatgtcgtccacagaggaggctaccaagtgtatcagccacctgcacaggactgaa
ctgcatggcaggatgatctctgtggagcgggctaaaaatgagccagcggggaagaagcca
gcagacaagaatgacaccaagaagtctggcggagacaggagacactcctccgactccaag
tctgatggaaaggatgagaaatctgaagagggaaaagatggcaaagtgcgaaatgagagg
actgtcgttatggacaagtccaagggagagcctgttattagcgtcaaaaccaaaagcaag
gagcgcagcacaaagagtcgggaccgcaagtcatctagtaaggagaagaaagacatcctg
tcattcgaccagatcaaggagcagagagaaagggaaaggcagagacaacgggagagggaa
atcagagaggtggaaagacggagatacactgaccgcgatcgtgaacgtgacaaccgccca
gaccgtgagcgtgagcgaatccgtctgtttagagagagagaggagaggaaacacttgatg
aggaaaagacactggctggaggctgagaagcagcgcctcgatgcagaccgtatggagcgt
cagttcctggagcgtgaaaggctacgtatagagtacgagaggcggcgcgagcaggagagg
atccttcgggagcgcgaggagctgagacggcagcaggagcagctgcgttatgaacaggag
cgacggcccatcaagaggccttatgacatggatggcaggaaagatgattggcctgagaag
cgcatggccatggacgaccggtacggccgcacagacttcggccggcaggagcgttatcag
gactttgaccacagagaccggggtcgttaccaagatgacatgatgatggacaggcgggac
aacgctcgtggcatgggtgcagacagagatggtcagcacttctcagacaggtcagacaga
catggcagagactggggtggaggttacgacaagcgcatgaacccgagggaaggaggtcga
gactgggagtctggacggaagatggaaggagacagagcatggcaaagtagagatggtgct
atcccaggccagagccatatggcacgtggaggaatggcaggccgtggtggctacatgaac
acaggaacatctcagtccctctccggagctctcaacagacagaaccagctaatgcagggt
ggcgggcttcagggtggagcttttggtcgacgctactga
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