KEGG   Lates calcarifer (barramundi perch): 108881398
Entry
108881398         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: scaffold attachment factor B1
  KO
K25092  scaffold attachment factor B
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108881398
Spliceosome [BR:lcf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    108881398
SSDB
Motif
Pfam: RRM_1 SAP RRM_5
Other DBs
NCBI-GeneID: 108881398
NCBI-ProteinID: XP_018528912
LinkDB
Position
LG17:11937661..11946570
AA seq 832 aa
MADPSADVEVPEGAEVRKLSELRVIDLKAELKKRSLDTTGVKSVLSERLKKAIEEEGGNP
DEIIVVPDSAPKKASSTPKRAARDTRQDNDEPEDSTIEEDSRDGHEDLQDDHENMQEMDI
LDMNVLDETENDNGIPAEDDEDYPENFHGEDDAEMNDEHDSRGFDSEDEARGPEMDESEM
LDKDEYMTCSSINMGQDPGADDLKEETENDKVAGSCLAEPLNEDRHQSHETSPEEEQAAT
AGGEDSVSDTGAKYDKAASGDGESNRDVVEGDTKEVGDSQNVPEETFDAENKSSQAVSVS
EQGAVGETVDSEIGSKKGEEDEKTEEKAAADSASTVKESSSVEGDDQKKSAEEKDGKTES
KDEKAAGSAAASSSRNLWVSGLSSTTRATDLKTLFSKYGKVVGAKVVTNAKSPGARCYGF
VTMSSTEEATKCISHLHRTELHGRMISVERAKNEPAGKKPADKNDTKKSGGDRRHSSDSK
SDGKDEKSEEGKDGKVRNERTVVMDKSKGEPVISVKTKSKERSTKSRDRKSSSKEKKDIL
SFDQIKEQRERERQRQREREIREVERRRYTDRDRERDNRPDRERERIRLFREREERKHLM
RKRHWLEAEKQRLDADRMERQFLERERLRIEYERRREQERILREREELRRQQEQLRYEQE
RRPIKRPYDMDGRKDDWPEKRMAMDDRYGRTDFGRQERYQDFDHRDRGRYQDDMMMDRRD
NARGMGADRDGQHFSDRSDRHGRDWGGGYDKRMNPREGGRDWESGRKMEGDRAWQSRDGA
IPGQSHMARGGMAGRGGYMNTGTSQSLSGALNRQNQLMQGGGLQGGAFGRRY
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggccgacccatcagcggacgtggaggtgccagagggcgcagaggttcgcaaactgtcg
gagctgagagttatcgatctgaaggccgagctgaagaaacgaagcctggacaccacgggc
gtcaagagtgtgctgtccgagcgtttgaaaaaggccattgaggaggagggtggaaatcct
gatgagattattgtggttccggattcagccccaaagaaagctagctcaacacctaaacgg
gctgccagagataccagacaagacaatgatgaaccagaggacagcactattgaagaggac
tcccgtgatggacatgaggatctgcaggatgatcatgagaacatgcaggaaatggacatc
ctcgacatgaacgtgctggatgagaccgagaatgacaatggaataccagctgaggatgat
gaggattatccagagaatttccacggagaagacgacgcagaaatgaatgatgaacatgac
agcaggggtttcgattcagaggatgaagcaagaggcccagagatggatgagtctgagatg
ctagataaggatgaatatatgacatgctcatcaatcaatatgggtcaggatccaggtgca
gacgacctcaaagaagaaacagaaaatgacaaagtagccgggtcttgtttagctgagccg
cttaacgaagatcgccaccagagccacgagacgagccctgaagaagagcaagccgccacc
gccggaggggaagacagtgtgtccgacactggtgccaagtacgacaaagctgcctctggg
gatggggagagcaacagggatgttgtggagggtgacaccaaagaggttggggactcacag
aatgtcccagaagagacatttgacgctgaaaacaaaagctcgcaggctgttagtgtaagt
gaacagggcgctgtgggtgagaccgttgattcagaaattgggtctaagaagggtgaggaa
gatgagaagacagaagagaaagccgctgcggattcagcctcgacagtgaaagagtcctct
tctgtagagggcgatgatcagaaaaagagcgctgaggaaaaagatggcaagaccgagtca
aaagatgaaaaggccgctggaagtgctgcagcaagcagtagcaggaacctgtgggtcagc
ggtctctcctccactaccagagcgactgatctgaagaccctcttcagcaaatatggcaag
gttgtcggagctaaggtggtgaccaatgccaagagccccggcgctcgctgctatggtttt
gtcaccatgtcgtccacagaggaggctaccaagtgtatcagccacctgcacaggactgaa
ctgcatggcaggatgatctctgtggagcgggctaaaaatgagccagcggggaagaagcca
gcagacaagaatgacaccaagaagtctggcggagacaggagacactcctccgactccaag
tctgatggaaaggatgagaaatctgaagagggaaaagatggcaaagtgcgaaatgagagg
actgtcgttatggacaagtccaagggagagcctgttattagcgtcaaaaccaaaagcaag
gagcgcagcacaaagagtcgggaccgcaagtcatctagtaaggagaagaaagacatcctg
tcattcgaccagatcaaggagcagagagaaagggaaaggcagagacaacgggagagggaa
atcagagaggtggaaagacggagatacactgaccgcgatcgtgaacgtgacaaccgccca
gaccgtgagcgtgagcgaatccgtctgtttagagagagagaggagaggaaacacttgatg
aggaaaagacactggctggaggctgagaagcagcgcctcgatgcagaccgtatggagcgt
cagttcctggagcgtgaaaggctacgtatagagtacgagaggcggcgcgagcaggagagg
atccttcgggagcgcgaggagctgagacggcagcaggagcagctgcgttatgaacaggag
cgacggcccatcaagaggccttatgacatggatggcaggaaagatgattggcctgagaag
cgcatggccatggacgaccggtacggccgcacagacttcggccggcaggagcgttatcag
gactttgaccacagagaccggggtcgttaccaagatgacatgatgatggacaggcgggac
aacgctcgtggcatgggtgcagacagagatggtcagcacttctcagacaggtcagacaga
catggcagagactggggtggaggttacgacaagcgcatgaacccgagggaaggaggtcga
gactgggagtctggacggaagatggaaggagacagagcatggcaaagtagagatggtgct
atcccaggccagagccatatggcacgtggaggaatggcaggccgtggtggctacatgaac
acaggaacatctcagtccctctccggagctctcaacagacagaaccagctaatgcagggt
ggcgggcttcagggtggagcttttggtcgacgctactga

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