Lates calcarifer (barramundi perch): 108881704
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Entry
108881704 CDS
T04895
Name
(RefSeq) myeloid differentiation primary response protein MyD88
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04620
Toll-like receptor signaling pathway
lcf04621
NOD-like receptor signaling pathway
lcf05132
Salmonella infection
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108881704
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108881704
04621 NOD-like receptor signaling pathway
108881704
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108881704
09171 Infectious disease: bacterial
05132 Salmonella infection
108881704
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Gene cluster
GFIT
Motif
Pfam:
TIR_2
TIR
Death
Motif
Other DBs
NCBI-GeneID:
108881704
NCBI-ProteinID:
XP_018529317
UniProt:
A0A4W6DB38
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Position
LG24:12405326..12409177
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AA seq
289 aa
AA seq
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MACAESKVDLETVPLTALNVTVRKKLGLYLNPRNAVAADWMAVAEAMDFSYLEIRNYEVA
QNPTTRILDEWQARSTDTTVGKLLSILMKVERSDIIEDLRSLIDEDVRRYCENLKKRGSD
PPLQVPEVDSCVPRTPERNGITLEDDPEGSPELFDAFICYCQSDFDFVHEMIRELEQTEY
RLKLCVFDRDVLPGSCVWTITSELIEKRCKRMVVVISDEYLDSDACDFQTKFALSLCPGA
QKKRLIPVVYKPMTKQFPSILRFLTVCDYTRPCTQAWFWVRLAKALSLP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgccgagtcgaaagtcgacctggagacggttcctctcaccgcgctgaatgtg
actgtgaggaaaaagttgggactttacctgaatcccagaaatgcagtggccgcggactgg
atggctgtagcagaggccatggacttcagttacctggagataaggaactatgaagtggca
caaaaccccaccacaaggatcctggacgagtggcaggctcggtccacagatacgacagtg
gggaagttgttgtcaatcctgatgaaggtggagaggagtgatattatagaggatcttcgc
tctttgatagatgaagatgtcaggaggtactgtgagaatctgaagaagagggggagtgat
cccccacttcaggttcctgaggtggacagctgtgtccctcgcacccctgagagaaacggt
atcaccctggaggatgaccccgaaggttctcctgagctgtttgatgccttcatctgctac
tgccagagtgacttcgactttgtccatgagatgatccgggagctggaacagacggagtac
aggctgaagctgtgtgtgttcgacagagatgtcctcccgggctcctgtgtgtggaccatc
acaagtgaactcattgagaagaggtgcaagaggatggtggtggttatatctgacgaatac
cttgacagcgatgcctgcgactttcagaccaagtttgctctcagcctctgccctggagct
caaaagaaacggctcatcccagtggtgtacaaaccaatgacgaagcagttccccagcatc
ttacgcttcctcaccgtatgtgactacaccaggccttgcacacaggcgtggttctgggta
cggctggccaaagctctttcgctgccataa
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