KEGG   Lates calcarifer (barramundi perch): 108882658Help
Entry
108882658         CDS       T04895                                 

Definition
(RefSeq) histone deacetylase 7-like isoform X1
  KO
K11408  histone deacetylase 7 [EC:3.5.1.98]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108882658
Enzymes [BR:lcf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108882658
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     108882658
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl
Motif
Other DBs
NCBI-GeneID: 108882658
NCBI-ProteinID: XP_018530820
LinkDB All DBs
Position
Unknown
AA seq 1008 aa AA seqDB search
MFTPQSDGISSSGNIIKTNRQDNIFHTVADSSVAVPVSCAALFPMDLRVGERGMRPGSDT
ALLTPLHPPLLLTQFSPQPCTSFSQQQLHQQIRFNVEQRRREQEHHEKQQELQQLKHKDK
SQQSAVASSLVKQKLQEVILKKRKQAAQERINSNTLTAAPVAYRKLGPDPGVSSQPLVSS
PSQPSPEGSEGTPLRRAASEPNLKVKHKLKKHLNTRKSPLTRKESAPPTVKHRVPDTLDS
SPSSSSTPVSGCSSPNDSLPNENGLLPSAGGLSHEAQKLLLRDGTLANFTIQSPSTLPTI
TLGLPANARAEGELSSLKMGRVPVVTAGGSSVFLPLSREDQAAHPHLPVIILEPSGLVHT
PLLTVPGLDSVPLQFATQLDHLSPGGAQPHKPLSRTRSEPLPQSPRTLHTHLLQQQHNTQ
LLERLKQQTHLGKLMSKSSEKPRLHQIPSEDMDSEDGGGMSPTEPTYQSRVRAESLREAE
PAASKSHEEQINLQHALILNQSLLWEQQKQLQQLHRQMETLAVPMLCGSGSGGVGSGLGV
HRPLSRTQSSPASTSLTLPEKTLSLAPQDTSSKPRFTTGLVYDSQMLKHQCTCGDNSSHP
EHAGRIQSIWSRLQERGLRGQCESIRGRKATLEELQSVHTERHVLLYGTNPLNRLKLDNR
KLAGILSQRMFVMLPCGGVGVDNDTIWNESHTSTASRMAAGSVVELAFRVAKGELKNGFA
VVRPPGHHAETSNPMGFCYFNSVAIAAKQLQHKLSVSKILIVDWDVHHGNGTQEVFYSDP
SILYISLHRYDDGNFFPGSGSPDEVGALAGEGFNVNIAWTGGLDPPMGDAEYIAAFRSVV
MPIAQEFSPDVVLVSAGFDAAEGNPAPLGGYKVSAKCFSFLTRQLMSLAGGRLVLALEGG
HDLTAICDASEACVSALLGIQDPLPEEVLLQKPNANAVHSLQTVIQIQSQYWQSVKAHSG
SVGLSYLAAQARDCEETDAVNALASLSVGVLSNKSLPDEPMEHDSDSM
NT seq 3027 nt NT seq  +upstreamnt  +downstreamnt
atgttcacaccacagtctgatggaatcagcagctctgggaacatcataaagacaaacaga
caggacaacatatttcatacagtggcagattcctcggtggcagtgccggtgtcgtgtgcg
gccttgtttcccatggacctcagggtgggagagcgggggatgcgccctggttcagacacg
gcgctcctcaccccgctgcacccgcctttgctcctcacccagttctcccctcagccctgc
acctccttctcccaacagcaactgcaccaacaaatcaggtttaatgtggagcagaggagg
cgagagcaggagcaccatgagaaacaacaggagttgcagcagctgaaacacaaagacaag
agtcagcaaagtgcagtggccagttccctggtgaaacagaaactccaggaggtgattctt
aagaagcggaaacaggcggcgcaggagagaataaactccaacactctgactgcagctcct
gtagcgtacagaaagcttggcccagacccaggtgtatcctcccagcctctggtctcatct
ccgtcacagccttcccctgagggttcagaggggacgccgttacgcagagcagcatctgag
cccaatctgaaggtgaaacacaagctgaagaaacacctaaacacccgcaagagcccactc
acccgtaaagagagtgccccgcccaccgtcaaacacagagtacctgacacactggactcg
tctcccagcagcagtagcaccccagtctctggctgtagttctcctaatgacagtctgccc
aatgagaatgggctactgccatctgcaggcggcctctcacatgaggcccagaagctgctg
ctcagagatggcactctagctaacttcaccattcagagtccctccactctgcccaccatc
acactgggactaccagccaatgccagggctgaaggagagctgtcctctctgaagatgggc
cgggtgcctgtggttacagccgggggctcgtcggtcttcctccccctgagcagagaggat
caggctgcccaccctcacctgcctgtcatcatcctggagccctctggactggtacacact
ccgctgctcactgttccaggcctagactctgtcccgctgcagtttgccacccagttggac
catctgtctccaggaggtgctcagccccacaagcccttgagcagaacacgctcagaaccc
cttccccaaagcccaaggacccttcacacacatctcctccaacaacagcacaacacacaa
ctactggagaggctcaaacagcagacccacctagggaagctgatgtctaagtccagcgag
aagcccagactgcatcagatcccctctgaggatatggactcagaggatggtggtgggatg
tcacccacagagccgacctatcagagcagagtgagggcagagtcactgagggaggcggag
ccagcagcatccaagagccacgaagagcaaataaacctgcaacatgcactcatactcaac
cagtcattgttatgggaacagcagaagcagctgcagcagctgcatcgacagatggagacc
ctggcagtacccatgttatgtggcagcggcagtggaggggttggtagcgggttgggtgtc
catcgcccactatcacgtacgcagtcatccccagcctccacttctctcactctgcctgag
aagaccctgagcctggccccacaggataccagcagcaaaccacgcttcaccacaggcctg
gtgtatgactctcaaatgctgaagcatcagtgtacatgtggagacaacagcagtcaccca
gagcatgctgggaggatacagagcatctggtctcgactacaggagagaggcctgagggga
cagtgtgagagtattcgtggtcgtaaggccactctggaggagctgcagtcagtccacaca
gagcgccatgtgttgctttatggcaccaacccactcaacagactcaaactggataaccgc
aaactggccggaatcctctctcagagaatgtttgtgatgttgccatgtggaggagtgggg
gttgataatgacacaatctggaatgagtcacacacctctacagcatcacgcatggcggca
ggcagcgttgttgagctggccttcagagtggccaaaggagaactgaagaatggctttgct
gtggtcagaccgccagggcatcatgcagaaacctccaatccaatgggtttttgttacttc
aattcagtggctatagcggctaagcagctccaacacaagctcagcgtcagcaagatcctc
attgttgattgggatgttcatcatggtaacggcacccaggaagtgttctacagcgacccc
agtattctctacatctcacttcatcgctatgacgacgggaacttcttccctggcagtggg
tcgccagatgaggtcggtgctttagcaggtgaaggcttcaacgtcaatatagcatggaca
ggaggactggacccacccatgggagatgctgagtacattgctgcattcaggtctgtggtg
atgcccatcgcccaagagttctccccagacgtcgttctggtgtcggctggatttgatgct
gctgagggcaacccagctcccctgggagggtacaaggtctctgccaaatgtttcagcttc
ctgactcgccagctgatgtctctagcagggggtcgtctggttttggcccttgagggaggt
catgaccttacagctatctgcgatgcatctgaagcctgcgtcagtgcactcctgggcata
caggacccactgccagaagaagtccttcttcagaagcccaatgctaatgcagtccattcc
ctgcagactgtcatacagatacaaagtcagtactggcagagtgtgaaggctcacagtgga
tcagtgggtctgtcctacctggctgctcaggcaagagactgtgaggaaacagatgctgtc
aatgctttggcctcgctctctgtgggagtcctttccaacaagagcctccctgatgagcca
atggagcatgacagtgactccatgtag

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