Lates calcarifer (barramundi perch): 108885629
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Entry
108885629 CDS
T04895
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like 1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03060
Protein export
lcf04141
Protein processing in endoplasmic reticulum
lcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
108885629
04141 Protein processing in endoplasmic reticulum
108885629
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108885629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108885629
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lcf02044
]
108885629
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
108885629
Secretion system [BR:
lcf02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
108885629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
DUF2975
Motif
Other DBs
NCBI-GeneID:
108885629
NCBI-ProteinID:
XP_018535567
UniProt:
A0A4W6FAX5
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Position
LG12:complement(15303326..15308348)
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AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN
LYVISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLDDPVH
AVIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggggattaaatttttggaagtcataaagccattctgtgcagtcctgccagaaattcag
aaaccagaaagaaagattcagtttagagaaaaagtactatggactgccatcacactattc
atctttctggtgtgctgccagattccactctttggcatcatgtcttcagactcagcagat
cccttctactggatgagagtaatcctggcttccaacagaggtactctgatggagctgggt
atctcacccattgtcacctcaggcctcatcatgcagctgctggctggtgccaagatcatt
gaagttggagacactcccaaggacagagccctcttcaatggagctcagaaattgtttgga
atgatcatcaccattggacaggccattgtatatgttatgactggcatgtatggagaccct
tcagagatgggtgctgggatatgcttgctcatcatcatccagctctttgttgcaggtctt
attgtcttgctgttggatgagcttctccagaagggctatggtctgggctcaggtatctct
ctcttcattgcaaccaacatctgtgagacgatcgtgtggaaagccttcagccccaccacc
gtcaacactggcagaggtactgagtttgagggagccatcattgctctcttccatctgctg
gccactcgcacggacaaggtgcgtgccctgagagaagccttctacagacaaaacctgccc
aacctcatgaacctcatcgccaccgtctttgtgtttgcagtggtcatatacttccagggt
ttcagagtggacctgcccatcaagtcagcacgctaccgtggccaatacaacacctacccc
atcaaactgttctacacctccaacatccccatcatcctgcagtctgccctggtctccaat
ctctacgtaatttctcagatgctctcaacacgttttagcggcaacttcctggtcaacctt
ctgggaacctggtctgacacctcgagtggaggaccagctcgggcctacccagtgggcggt
ctctgctattacctttctcctccagagtcatttggttctgttttggatgacccagttcat
gctgtcatctacatcgtcttcatgctcggctcctgcgccttcttctccaagacctggatt
gaggtctcgggatcctctgccaaagatgtggcaaagcagctgaaggagcagcagatggtg
atgagaggacacagagagacctctatggttcatgaacttaacaggtacatcccaacagct
gctgcatttggtggtctgtgtataggagggctgtctgtcatggctgacttcctaggtgcc
attggttcgggtacaggaatcctcttggcagttaccatcatctaccagtactttgagatc
tttgtgaaggagcagagtgaagtgggcagcatgggagcactgctcttctag
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