Lates calcarifer (barramundi perch): 108885957
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Entry
108885957 CDS
T04895
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108885957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108885957
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108885957
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
108885957
NCBI-ProteinID:
XP_018536026
UniProt:
A0A4W6FVL5
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Position
LG15:complement(12019980..12039252)
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AA seq
555 aa
AA seq
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MMMDGRPPPPPPPPPLLQLLLALLAIAGGGLGADTEERLVEHLLNPAHYNKLIRPATNGS
ELVTVQLMVSLAQLISVHEREQVMTTNVWLTQEWQDYRLTWVPEEFDGMMKVRLPSKHIW
LPDVVLYNNADGVYEVSFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTLRF
RSWTYDRTEIDLVLRADVASMDDFTPSGEWDIIALPGRRNENPADPTYVDITYDFIIRRK
PLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLD
VPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMPPWVKLVFLNKLPALLFMRQPR
NSCERQRLRQRRRAQEQKEGGRSGEAGALMVGLGLGGAGGNGGGPSTGVFGKEDSDPCTC
YVNRASVKQFGGDLGGAGGGSMDGLNRVREGREGGSGNLPRGQQAAGGPVLSQALLAQAC
PGFEEAVEGVRFIANHMKSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTMGMFLQP
LFQNYTAKTITSSPG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggacggccggccgccgccgccgccgccgccaccgccgctgctgcagctgctg
ctggctctcctcgccattgctggaggcggcctcggggcagacacggaggagcggctggtg
gagcatctcctaaacccggcccactacaacaaactgatccgtcctgcgactaatggctcc
gagctggttaccgtgcagctgatggtgtcgttggcccagctcatcagtgtgcatgaacga
gagcaagtgatgaccactaatgtctggctaacacaggagtggcaggactatcgtctgact
tgggtccctgaggagtttgatggaatgatgaaggtcaggctgccctcaaaacacatctgg
ctgcctgacgtggtgctctacaacaatgccgacggggtgtacgaggtgtcattctactct
aatgcagtggtctcctacgatggcagcatcttctggttgcccccggccatctataagtca
gcctgtaagattgaggtcaagcacttccccttcgaccagcagaactgcacgctgcgcttc
cgctcctggacctacgaccgcaccgagattgacctggtgctccgcgctgacgtggccagc
atggacgacttcacgcccagcggagagtgggacatcatcgccctgccaggcagacggaac
gagaacccggctgaccccacctatgtggacataacgtatgacttcatcatccgcaggaag
cctcttttttacaccatcaacctcatcatcccatgtgtcctcatcacctcgctggccatc
ctggtcttctacctgccttcagactgtggagagaagatgacgctctgcatctcagtgctg
ctggctctcactgtgttcctgcttctgatctccaagatcgtaccacccacttcactggac
gtccctctggtggggaaatacctgatgttcactatggtcctggtcaccttctctatcgtc
accagtgtgtgcgtgctcaacgtgcaccaccgctcgcccaccacacacaccatgccgcct
tgggttaaactggtgttcctcaacaagcttcccgccctgctttttatgcgccagccgagg
aatagctgtgagcggcagcggctgcgccaaagaaggagagcccaggagcagaaggagggt
gggcgcagtggggaggcaggggccttgatggtgggtctcgggctgggcggtgctggcggt
aacggagggggaccctccacgggggtattcggcaaagaggacagtgacccttgtacctgc
tatgtgaaccgagcgtccgttaaacagtttggaggggatctgggaggtgcaggaggtgga
tccatggatggtctgaacagggtgagggagggccgagaagggggctctggaaatctgcca
agagggcagcaagcagcagggggtcctgttctgtctcaggccctgctggctcaagcctgt
ccaggcttcgaggaagctgtggaaggagtacgcttcattgccaaccacatgaagagcgag
gatgatgaccaaagtgtgagcgaggactggaagtacgttgccatggtgatcgaccgcctc
ttcctgtggatctttgtgtttgtgtgcgtgtttggcacgatgggcatgttcctgcagccg
ctcttccagaattacacagccaagaccatcaccagctcgccaggctga
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