Lates calcarifer (barramundi perch): 108886045
Help
Entry
108886045 CDS
T04895
Symbol
ank1b
Name
(RefSeq) ankyrin-1 isoform X3
KO
K10380
ankyrin-1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108886045 (ank1b)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
108886045 (ank1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
UPA_2
ZU5
Death
Motif
Other DBs
NCBI-GeneID:
108886045
NCBI-ProteinID:
XP_018536170
LinkDB
All DBs
Position
LG9:complement(7282614..7345836)
Genome browser
AA seq
1878 aa
AA seq
DB search
MAQAAKQLRKTKDLAEAAAQEQREKEEEKIKKRNRSRDRRRKADAATSFLRAARSGNLDK
ALDHIKNGLDINTANQNGLNGLHLASKEGHVKMVLELLHAGIELEATTKKGNTALHIAAL
AGQEKVVAELVNYGANVNAQSHQKGFSPLYMAAQENHLEVVKFLLENGANQSLPTEDGFT
PLAVALQQGHENVVALLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG
FTPLHIAAHYENMSVAQLLLNRGANVNFTPKNGITPLHIASRRGNVMMVRLLLDRGAQID
AKTKDELTPLHCAARNGHVRIIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVRQLLQ
YNAEIDDITLDHLTPLHVAAHCGHHRMAKVLLDKGAKANARALNGFTPLHIACKKNHMRS
MDLLLKHSASLEAVTESGLTPLHVAAFMGHLNIVKNLLQRGASPNASNVKVETPLHMASR
AGHCEVAQFLLQNAAQVDAKAKDDQTPLHCAARMGHKELVKLLLEHKANPDSATTAGHTP
LHIAAREGHVHTIRILLDAGAQQIKMTKKGFTPLHVASKYGKVDVAELLLERGANPNAAG
KNGLTPLHVAVHHNNLDVVKLLVSKGGSAHSTARNGYTPLHIAAKQNQMEVASCLLQNGA
SPNAESLQGITPLHLASQEGRPDMVALLISKQANVNLGNKNGLTPLHLVAQEGHVGIADT
LVKQGASVYAASRMGYTPLHVACHYGNIKMVKFLLQQQAHVNSKTRMGYTPLHQAAQQGH
TDIVTLLLKHGAQPNEITSNGTSPLGIAKRLGYISVIDVLKLVTEESVSAITTEKHRMSF
PETVDEILDVSEDEGVAQLTLGDELLGMDGARYLKLDDFKDQDDDFLSPKKTLRDFEGGM
GTTPYSPAIPRIPCVSPETVLLDQHTPIPLPKEYDEDSLIPSSPATETSDNVSPVASPIH
TGFLVSFMVDARGGSMRGSRHHGLRVIIPPRTCAAPTRITCRLVKPQKLTTPPPLVEGEG
LASRIISLGPSSMQFLGPVIVEIPHFASLGRGDRELVVLRSENGSVWKEHRNRYGDEVLE
TILNGMDEDLESQEELEKKRIRRIISTDFPLYFAVVSRIQQESDLIGPEGGRLTSKLVPH
VEAIFPETAVTKRVRLGLQAQPIPDELLTRQLGNQATFSPVVTIEPRRRKFHRPIGLRIP
LPPSWRESPRDAGEGDTTSLRLLCSVIGGTAPAQWEDITGTTKLMYANNCANFTTNVSAR
FWLADCPRTAEAVTFANLLYRELMSVPYMAKFVIFAKMNEAREGRLRCYCMTDDKMDKTL
ELHENFTEVARSRDIELMEGMPLHLECSGNLVPIRKATQQPRSFSFQAFRDNRLPVSVKV
RDSNKDATGFLSFLRKCTKYEDTQHVLCNLNISMPPCVKVVGSEERRRTLTPLALRERYS
ALNEPGVATVNAMERTEIKINIISEQLGLSWAELARELQFGVDDINRIRVENPNSLLDQS
SALLNLWASREGKRAKMESLYTALKNIDRADIVTSLEGQAPQPLPGSSEEGACRLSDRDS
TLLSPSVLNGYGLVQEELLSPASMQYSLPSPLGVEPYWQEVSSLECAPIATTEEDTLMEM
SDVQVWPAGVSPSLVTVEDSSLEGSSRADDSEGATLSLPCSLGRPSSGASGASGSIMELE
EEEEEEEEEGEVEEEEVPPELASVLAERDRVRASGAVPKVNLNGQLGGQRSDGRRGEALA
AGGGAKGGGAGLGSVEGISVVAGQQVYAHRCEMSGLSRAAEHNGDNRMVGGGAFQPYLPD
KDSLQGWVGSVSSGRDGSVPGLRVAQEALLTPREEKEDYSAEPQFVDEHGSVLARRVGVD
VRKGAQSVQRTSLRRVKH
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagccgccaagcagctccgcaagaccaaggaccttgcggaggccgccgcccag
gagcagagggagaaggaggaggaaaagataaaaaagaggaatcgatccagggaccgcagg
cgcaaggcagatgcagccaccagctttctgcgtgcagctcgttcagggaacctggacaag
gctctggatcacatcaagaatggactcgacatcaacacagctaatcaaaatggtctcaac
gggttacacctggcctctaaagaaggtcatgtcaaaatggtcctggagctactacatgca
ggcattgagctggaagccaccaccaagaaagggaacactgctctccatattgcagcgctg
gcagggcaggagaaagtggtggcggagcttgtcaactacggtgccaatgttaatgcccag
tcacatcagaaagggttcagccctctctacatggcagcacaggagaatcacttagaggtg
gtcaagttcctgctcgagaacggtgccaatcaaagtctccctactgaggatggcttcact
cccctggccgtagcccttcagcagggccacgaaaatgttgtggcactgctcataaactat
ggcaccaagggcaaggttcgcctcccagcactacacatcgctgcacgaaacgatgacacg
cgcactgccgcagtgctcctacagaatgatccaaaccctgacgtactcagcaagactggt
ttcacacctctccatattgcagcccactatgagaatatgagcgtagcccagctgctcctt
aacagaggagccaatgtaaacttcacacccaagaatggcatcacaccccttcatatagcc
tccaggaggggcaatgtgatgatggtcagactactgctggacagaggagcacagattgat
gccaaaacaaaggatgagctgactcctctccactgtgcagccaggaatggtcatgttcgc
attattgagatccttctggaacatggtgctcctatccaggcaaaaaccaagaatggtctg
tcccccatccacatggcagcccagggggatcacatggactgtgtcaggcagctactgcaa
tacaacgccgagattgatgatattacgctggatcatttaacccctcttcatgtagcagcc
cactgtggtcaccatcgcatggcaaaagtcctactggacaaaggggccaaagcaaatgca
cgagctctgaatggcttcacacctctccatattgcttgcaagaagaaccacatgcggtcc
atggacctgctgcttaagcactctgcctccttagaagctgtcacagagtctggtcttact
cctcttcatgtagcagcattcatgggccatctgaacatagtgaagaacctgctccaaaga
ggggcttcacctaatgcttccaatgtgaaagtggagactcccctccacatggcctccaga
gcaggacactgtgaagttgctcagttcttgctgcagaacgcagcgcaagtggatgccaag
gcaaaggatgaccagacacctctacactgtgcagcccgtatgggccacaaagagcttgtc
aagctgctccttgagcacaaggccaaccccgactcagctacaactgcaggccatacgccc
ttacacatcgctgcgcgtgaaggacatgtccacaccattcgaatactgttggatgctgga
gctcagcaaatcaagatgacaaagaaaggcttcactcccctccatgtggcctctaaatat
ggaaaggtggatgtggcagaactacttctggagagaggagccaaccctaacgcagctggg
aagaatggtctgacaccccttcatgtggccgtccatcacaacaacctggatgttgttaaa
cttctggtcagcaagggaggatctgcacacagcactgctcgaaatggctacactcccctg
cacatagcagccaagcagaaccagatggaggtggccagttgtctgctgcagaatggggct
tcacccaatgccgagtccctccaaggcatcacgcccctacacctggcttcacaggaggga
cgacctgacatggtggctctgctcatctccaaacaggccaatgttaatctgggaaacaag
aatggactgacccctctgcatcttgtggcccaggagggtcatgtgggcatcgctgacaca
ttggtcaaacagggagcttctgtgtatgctgcttcacggatgggctacacaccccttcat
gtggcctgtcactatggcaacatcaagatggtgaagttccttctgcagcagcaggctcat
gtaaacagcaagacaaggatgggctacacacctctacaccaggcagctcagcagggccat
actgatattgtcaccctgttgttgaaacacggagcccagcccaatgagattacttcgaat
gggacatctcccctgggcattgcaaagcggctgggttacatctctgtcattgacgtgctg
aagctggttaccgaggagtctgtctccgcgatcactacagagaagcatcggatgagtttt
cctgagacagtggatgagattttggatgtttcagaggatgaaggggttgcccagctaacg
ttaggagacgagttgctcgggatggatggagcacgctacttaaagcttgatgatttcaag
gaccaggacgatgacttcctctcccctaagaagactctaagagactttgagggtggcatg
ggtaccacgccgtattctccagctattcccagaatcccttgtgtgtccccagagacagtt
ctgctggatcagcacactcccattcccctgccaaaggagtatgatgaagactctcttatc
ccgagtagtcctgctacagagacctcagacaatgtcagccccgtggccagccctattcat
acgggcttcctagtgagtttcatggtggatgctcgaggaggctccatgcgaggcagcaga
caccacggcttacgggttatcattcctcctcgaacctgtgctgcaccgacacgcattacc
tgccgtctggtcaaacctcagaaattgaccacacctcctccgctggtggagggggagggg
cttgctagccgtatcatctccctagggccgtccagtatgcagttccttgggcctgtaatt
gtggaaatccctcactttgcctcactgggccgaggagaccgagagctcgtggtcctccgc
agtgaaaatggctcagtctggaaggaacatcgcaatcgctatggcgatgaagtgttggaa
actattctgaatggcatggatgaagacctggagagtcaagaggagcttgagaagaagaga
atccgtcggattatctccactgactttcccctctactttgccgtggtctcccgcattcag
caggagagtgatctgattggtcctgagggtggccggctgaccagtaagctggtgccccat
gttgaggccatcttccctgagacagcagtcaccaaaagagtgagactaggactgcaggca
cagccaatccctgatgaattgctgacgcgacagcttggtaaccaggcgaccttcagccca
gtggttaccatcgagccccgccgacgcaagttccaccgcccaatcggattacgcatccca
ctgccaccatcctggagagagagtcctcgggatgctggggagggtgatactaccagcttg
cgcctcctctgcagtgtcattggtggaacagcaccagctcagtgggaggacatcactgga
accacaaagctgatgtacgccaataactgtgccaattttaccaccaatgtctctgcaaga
ttctggctggcagactgtccacgcacggcagaggcagtgacctttgccaatttgctgtac
cgggagctaatgtccgtgccgtacatggccaagtttgttattttcgccaagatgaatgaa
gcacgtgagggacgcttgcgttgttactgcatgacagatgacaagatggacaaaactctg
gagctgcacgaaaacttcactgaagtggcccgcagtcgagatattgagctgatggagggc
atgccgttgcacctggagtgttccgggaacctagtgcccatcaggaaggccacccagcag
cctcgcagcttcagcttccaggccttcagagataacagactgcccgtctctgtcaaggtc
agagatagcaacaaggatgccactgggtttttatcctttctccggaagtgcaccaagtac
gaggacacacagcatgtactgtgtaaccttaacatatccatgccaccttgtgtcaaggtt
gttggaagtgaggagcgcaggagaactctaacccctcttgccctgagagaacgctacagt
gcgctgaacgagcctggcgtggccacagtaaatgccatggagaggactgagatcaaaatc
aacatcatatctgaacagctgggtttgagctgggcagagttggcacgagagcttcagttt
ggcgtggatgacatcaatagaatccgtgtggagaatcccaattcactgctggaccagagc
tctgccctgctcaacctctgggccagcagagagggcaaaagagccaagatggaaagcctc
tacactgccctgaagaacatcgaccgtgcagacattgtaacatctctggagggtcaggct
ccgcagccactgcccggttcttcggaggagggcgcctgtcgactcagtgaccgcgactcc
accctactgtcccccagtgtcctcaatggttatgggctggtgcaggaagagcttctgtcc
ccagcctccatgcagtacagcttgccctctccactgggcgtggagccctactggcaagaa
gtgtccagcctcgagtgcgcccccatcgccaccacagaggaagacacgttaatggagatg
tcggacgttcaggtgtggccagcaggggtcagcccctcgctggtcacggtggaggactcg
tcgctagagggcagcagtcgcgccgatgactcagagggcgccacgctctccctcccttgc
agcttgggtcgcccgagcagcggagccagcggggccagcggctccattatggagctggag
gaggaggaggaggaggaggaggaggaaggggaggttgaggaggaggaggtgccaccagag
ctggcaagtgtgctggcagaaagagacagggtgagggccagtggtgctgttcctaaggtc
aacctaaatggccagcttggaggtcagaggtcagatgggaggagaggggaagccctcgca
gcaggaggtggagcaaaaggaggaggtgcagggctgggttcagtggaagggatttctgtt
gttgcaggccagcaggtgtatgcccatcggtgtgagatgtcgggactgagtcgggctgca
gaacacaatggagacaaccggatggtgggaggcggagcatttcaaccctatctaccagac
aaggactccctgcagggctgggtgggctcagtgtcttcgggacgggacggcagcgtgcca
ggcttgcgcgtggcccaggaggctctgctgactccgagagaagagaaagaagactattct
gctgagccgcagtttgttgatgaacacggaagcgtactcgccagaagggtgggggtggat
gtgagaaagggcgctcagtcagtgcagcgcaccagtctgcggagagttaaacactga
DBGET
integrated database retrieval system