Lates calcarifer (barramundi perch): 108888123
Entry
108888123 CDS
T04895
Gene name
sdha
Definition
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
KO
K00234
succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:
1.3.5.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00020
Citrate cycle (TCA cycle)
lcf00190
Oxidative phosphorylation
lcf01100
Metabolic pathways
lcf01200
Carbon metabolism
Module
lcf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lcf_M00148
Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108888123 (sdha)
09102 Energy metabolism
00190 Oxidative phosphorylation
108888123 (sdha)
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
108888123 (sdha)
SSDB
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
DAO
Other DBs
NCBI-GeneID:
108888123
NCBI-ProteinID:
XP_018539471
LinkDB
Position
Unknown
AA seq
663 aa
MASVRAASRLLSKRVLSKTTTVPAASVQGSRNFHFSIYGKKKNAKVSDDISTQYPVVDHE
FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDDWRW
HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTEDGKIYQRAFGGQSLKYG
KGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECKGVIALCMED
GSIHRFRAQNTVIATGGYGRTYFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIY
GAGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPEK
DHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGVPTNYKGQV
ITHTGGEDKVVRGLYACGEAACASVHGANRLGANSLLDLVVFGRACALTIAEEHKPGEKL
SPLQPSAGEESVANLDKLRFANGNLRTSEIRLNMQKTMQAHAAVFRTGSVLKEGCDKMDA
IYQTLDDIKTFDRGIVWNTDLVETLELQNLMLNAVQTIHAAEQRKESRGAHAREDFKDRV
DEYDYSKPLQGQEKKPYDQHWRKHSLSFVDPKTGKVTLKYRPVIDSSLDEQDCAHVPPAI
RSY
NT seq
1992 nt
+upstream
nt +downstream
nt
atggcgagtgttcgtgctgcgtcccgtctcctctccaagagggtactatctaaaacgaca
acagtcccggctgcttcagttcagggttccaggaactttcacttctccatctatggcaag
aagaaaaatgccaaagtatcagatgatatctcgactcagtacccagttgtggatcatgag
tttgatgctgtggtggtaggagctggaggggcaggacttagggcagcctttggcctgtca
gaggctggcttcaacactgcatgcgtcaccaaactcttccccaccaggtctcacactgtt
gctgcacagggtgggattaatgcagctcttgggaacatggaggaggatgactggaggtgg
catttctacgacacagtaaagggatctgactggctgggagaccaggatgctattcactac
atgacagagcaggcacctgcagctgtggtggagctggagaactttggtatgccattcagc
cgcactgaagatgggaagatctaccagagagcctttggaggtcagagtctcaagtatgga
aaaggaggccaggctcaccgttgctgctgtgtagcagacaggacaggacactcactgctg
catacactttatggtcggtcactccgttatgacactagttactttgtggagtactttgcc
ctggacctgctgatggaaaatggagagtgtaaaggagtcattgctctctgcatggaggac
ggatccattcaccgcttcagagcccagaatactgtcattgctactgggggttatggaaga
acctatttcagctgcacatctgcccacactagtacgggggatggaaatgcaatggtgacc
agagctggcctgccctgccaggatttggagtttgtacagttccatcccactgggatctac
ggagctggttgcctgatcacagagggttgccgtggtgagggagggatcctgatcaacagt
gagggagagcgcttcatggagcgctacgcacccaacgccaaagacctggcctccagagac
gtggtgtcccgctccatgaccatcgagatcagagagggcaggggtgtcggtccagagaag
gaccacgtgtacctgcagcttcaccacctacctcctcagcagctggccacgaggctgcct
ggtatctcagagacagccatgatcttcgctggagtcgacgtcaccaaggagcccatccct
gtcctgcccaccgttcactataatatgggtggagtgcccacaaactacaagggacaggtg
atcactcataccggtggagaggacaaggtggttcggggactgtatgcctgtggtgaggct
gcctgtgccagtgtccacggtgctaaccgactgggtgccaactccctgcttgatctggtg
gtatttggcagagcctgcgctctcaccatcgccgaagaacacaaacctggagagaaactg
tctcctctgcagcccagtgcaggagaggagtctgtggccaacctggacaagttgaggttt
gccaacggaaacctaaggacctctgagatcaggctcaacatgcagaagaccatgcaggct
catgctgctgtgttccgtaccggctctgttctgaaggagggatgcgacaagatggatgct
atttaccagaccctggatgacatcaagaccttcgacagaggcattgtgtggaacacagac
ctggtggaaacattggagctacagaatctgatgcttaacgctgtccagaccatccacgct
gctgagcagaggaaggagagcaggggagcccacgccagagaggatttcaaggaccgtgtg
gatgaatatgactactccaagcccctgcagggtcaggagaagaagccatacgatcagcac
tggaggaaacacagtctgtcctttgttgaccccaagactggaaaggtgaccctgaagtac
cgtcctgttatcgacagctctctggacgaacaggactgcgctcacgtccctcctgccatc
cgctcctactaa
DBGET
integrated database retrieval system
