Lates calcarifer (barramundi perch): 108888182
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Entry
108888182 CDS
T04895
Name
(RefSeq) B-cell receptor CD22 isoform X1
KO
K06467
CD22 antigen
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108888182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108888182
04091 Lectins [BR:
lcf04091
]
108888182
CD molecules [BR:
lcf04090
]
Proteins
108888182
Lectins [BR:
lcf04091
]
I-type lectins (Siglecs)
108888182
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
V-set
ig
Ig_C17orf99
CcmD
SIT
Motif
Other DBs
NCBI-GeneID:
108888182
NCBI-ProteinID:
XP_018539561
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All DBs
Position
LG15:27529740..27536049
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AA seq
536 aa
AA seq
DB search
MMESWILIILVIIPGVWSGNWGVTFEDQCALKGTSIVMKCSYDYPYGHFVNNVGWSKAQY
VSGRLRLFLLSKLASPRGHFRYVGNHRRNCDLEINNVQHSDEGNYYFSFVTTFNKWTSKT
SAYLSVKELTTLVQPSTVTEGDDVSLTCVSGCPLHTTTVWFRDGRPVQKPVFQASREDAG
KYYCAVLGQEMLRSASVPLNVQYAPEKVTLSVSPSGNVIKGSSVTFTCSSDANPPVAGSG
YSLYKDRQFVSSGQNHIIFDIQSSHSGLYHCQAWNNISRRGVDLINSTEIHLDVHYHPMN
ISVSVDPPHVTEGSSVNLTCNSAANPVAENYTWYKRTDSPSSGSMLQVGSGQVLSLPSVE
ASHTGLYLCQARNSVGENNSTEVLLTMTGKEHGSHYIPILSAVGVVLFVLVLLLLWKKLR
TRAEKKQTVYDPALNGEGSSFSASEDQIDPVYANVHTFPPSVAAQDVASHSQRNSHCEYD
DPTSSEVEVTYTAVTIKPRDPGPPHHINNNRAPQESWSKAGERDDSVIYATVAKSS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaagttggattctgatcatcctggttattatcccaggtgtctggagtggaaac
tggggcgtgacctttgaagatcagtgtgctctgaaagggacatcgatagttatgaagtgc
agctatgactacccttatggtcattttgtcaataatgtgggctggtctaaagcccagtat
gtgtctggccgattgaggctgtttctcctctctaaactcgcctcaccccgaggccacttt
agatacgtgggcaaccaccgcagaaactgtgatttggagatcaacaacgtacaacacagt
gatgaaggaaactactattttagttttgtgacaacattcaacaaatggacgagtaaaacc
tctgcttatttgtccgtaaaagagttaaccaccctcgtacagccgagcactgtgacagag
ggagatgacgtcagcctgacctgtgtgtcaggatgtcccttacatacaaccactgtctgg
tttagagatggaagacctgtgcagaaaccagtcttccaggccagtagagaagatgctggg
aagtactactgtgcagtcctgggacaagagatgctcagatctgcctctgttcctctgaat
gttcaatatgctccagagaaagtaacactgtcggtgagtccatcaggaaacgtcatcaaa
ggaagttcagtgactttcacctgcagcagtgacgccaacccacctgtggcaggaagtgga
tacagcctgtacaaggacagacagtttgtcagttcaggacagaaccacatcatctttgac
atccagtccagccacagtggactgtaccactgtcaggcctggaataatatcagccggagg
ggcgttgacttgataaactctactgagatccacctcgatgtccactaccatccaatgaac
atttcagtttcagtggatcctccacatgtcactgagggcagcagtgtgaatctgacctgc
aacagcgcggctaaccctgtggcagaaaactacacctggtacaagaggacagattctccc
agctccggctccatgctgcaggtgggctcaggccaggtgctgtctcttccctctgtggag
gcatcccacactggactctacctctgccaggccaggaacagtgtgggggaaaacaactca
actgaggtgctgctgaccatgacaggaaaggagcatggcagccattatatcccaatcttg
tccgctgtcggagttgttctttttgtgcttgttcttcttttgctctggaagaaactgaga
acccgtgcagagaaaaaacagactgtgtatgaccccgctctgaatggggaaggttccagc
ttttcagccagtgaagatcagattgacccagtttatgccaacgtccacacatttccaccc
tctgttgctgctcaggatgttgcttctcattcacagaggaactcacactgtgaatatgat
gatcccacttcttctgaagttgaggtcacctatacagcagtgaccatcaaacccagagac
cccggtccccctcatcacattaacaacaacagagctcctcaggagtcctggtccaaagca
ggagagagggacgactcagtaatttatgctactgtggctaagtccagctga
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