KEGG   Lates calcarifer (barramundi perch): 108888449
Entry
108888449         CDS       T04895                                 
Name
(RefSeq) DNA polymerase delta subunit 4
  KO
K03505  DNA polymerase delta subunit 4
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03030  DNA replication
lcf03410  Base excision repair
lcf03420  Nucleotide excision repair
lcf03430  Mismatch repair
lcf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108888449
   03410 Base excision repair
    108888449
   03420 Nucleotide excision repair
    108888449
   03430 Mismatch repair
    108888449
   03440 Homologous recombination
    108888449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcf03032]
    108888449
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108888449
DNA replication proteins [BR:lcf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    108888449
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      108888449
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     108888449
SSDB
Motif
Pfam: DNA_pol_delta_4 Umbravirus_LDM Phage_cap_E
Other DBs
NCBI-GeneID: 108888449
NCBI-ProteinID: XP_018539951
UniProt: A0A4W6FVH3
LinkDB
Position
LG5:9714861..9718038
AA seq 108 aa
MTTKHRLITDSFKVVKKARRGGKREKRSTPPPPQKEAETDTVRQEELQKLRQFDLDWRFG
PCTGISRLQRWERAQLHGLNPPEEIRELLLKTHIDPEYKLSLWSEYPL
NT seq 327 nt   +upstreamnt  +downstreamnt
atgacgaccaagcacagactgataactgattcattcaaggtggtaaagaaagcaaggagg
ggtgggaaacgagagaagagatctactcctcctccaccacagaaagaggctgagactgac
acagtcagacaggaggagctgcagaagctcagacagtttgatctggactggagatttggg
ccctgcacaggtatcagcaggctgcagagatgggagagagcacagcttcatggtctgaac
ccacctgaggagatcagagagctgctgctgaaaacacacatcgatcctgagtacaagctg
agcctgtggagtgaatatcctttgtga

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