Lates calcarifer (barramundi perch): 108892068
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Entry
108892068 CDS
T04895
Symbol
mindy3
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108892068 (mindy3)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108892068 (mindy3)
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
108892068 (mindy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
EF-hand_6
LXG
Motif
Other DBs
NCBI-GeneID:
108892068
NCBI-ProteinID:
XP_018545030
LinkDB
All DBs
Position
LG15:21334213..21353821
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AA seq
456 aa
AA seq
DB search
MSELNKEVVDLVWGRPSNGGVSASIFRRWTQGFVFSENEHTALEQFEGGPCAVIAPVQAF
LLKNILFNRESSNWRQMPEEEQKTALCSTLSEILESACSSPSTGFCLVTWAKGQSLHTST
HTNSQSQSQTQDVPEPESSQPPQEQQPTALAAEDLGFERFHSVLHKRTVMSVADLREEVL
SLYHTWRGCCGVLLFLYSVILTKGIENIRNEIQDTMEPLIDPVHGHGSQSLVNLLVTGHA
VSNVWDGDRECSGMKLHGIHKQASVGFLTLMESLRYCKVGAFLKSPKFPIWILGSETHLS
VFFTKEMSLVGPECPSEQARRVFQSFDPEDNGFIPESLLEDVMKALDLVSEPEYVSLVKG
KLDPESLGIILLGPFLLEFFPDQDSGIPDSFPVYHYNGLKQSNHNERVEYVEGTALVLGF
EDPMVRTDDTPVKRCLQTKWPYIELLWTTDRSPSLN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattaaataaagaggtggtggatttggtctgggggagaccctccaatggagga
gtgtctgcgtctatcttccgtagatggacccaaggatttgtcttcagtgagaatgagcac
acagccctggagcagtttgagggagggccgtgtgctgtaattgcacctgttcaggctttc
ctcttaaagaacattctgtttaacagagaaagttccaactggagacagatgccagaggag
gagcagaaaacagcgctctgttccacgctgagtgaaattttggagtctgcctgttccagc
ccgtccacagggttctgcctggtgacctgggcaaagggacagagcctgcatactagcaca
catactaactcgcagtcacagtcgcaaacacaggatgtgccagagccagagagcagtcag
ccgccacaggagcagcaacccactgctttggctgctgaggaccttggctttgagcgattt
cacagtgttctccacaagcggactgtaatgtcagtggctgatcttagagaggaggtgctg
tctctctaccacacctggagggggtgctgtggagttttgcttttcctctactcagtcatc
ctaaccaagggcatagagaatatacgaaatgagatccaggacacgatggagcctctcata
gaccctgtgcatggtcatggcagtcagagcctggtcaacctccttgtaactggccacgct
gtctctaatgtctgggatggagacagggagtgctcaggcatgaaactacatggtattcat
aaacaagcatcagttggcttcctcacgctcatggaatcactacgctactgcaaggtcggg
gcattcctcaagtctccaaagttccctatttggatccttggcagtgaaactcacctctct
gtgtttttcaccaaggagatgtccctggtaggtccagagtgtccatcagaacaggcaagg
agggtcttccagtcttttgatcctgaagataatggcttcatcccagagtctctcctggaa
gatgtgatgaaggcccttgaccttgtctcagagcctgagtatgtcagtctggtgaagggt
aagctagatccagagagtttgggcataattcttctgggcccgttcctgttggagttcttc
cctgatcaggattcaggaatcccagactcatttcccgtctaccactacaatggacttaaa
cagtccaaccacaacgagagggtggagtatgtggaagggactgctttggtgctaggtttt
gaggaccccatggttcggacggatgacactccagtcaagcgctgcctacagaccaagtgg
ccgtacatcgagctgctgtggaccaccgaccgctccccatcactgaactag
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