Lates calcarifer (barramundi perch): 108893744 Help Entry 108893744         CDS       T04895                                  Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism lcf  Lates calcarifer (barramundi perch) Brite KEGG Orthology (KO) [BR:lcf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:lcf04515]     108893744 Cell adhesion molecules [BR:lcf04515]  Cadherins   Cadherin related    108893744 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_2 RET_CLD1 Cadherin_4 CADH_Y-type_LIR TMEM154 Cadherin_C_2 Motif Other DBs NCBI-GeneID:  108893744 NCBI-ProteinID:  XP_018547577 LinkDB All DBs Position LG20:complement(21649562..21732747) Genome browser AA seq 3306 aa AA seqDB search MPVTSKGSRRRAWVSGPCVCSSPWRRTPLFYFCIVLVLIQSTTVLGALELQLDEEQPAGT IVGDISAGLPPGVTASFYFISDHEGTGVGSDLNIDETTGIITTARRLDREERDHYSFIAV TMTGLTIEVSVTVNDINDHAPVFPKKKAVLKIPEHTELGTRFSLEPATDADKDQLTTQGY AIREGNVGQAFRLETKRAANKVLYLDLMVNGLLDREKRSSYNLVLEAFDGGSPRRMGSMS LEVIVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFATDEDEGDNGLVLYEINRRQSD PDRYFVMDMKSGVITLNRPLDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQP TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSI IYLIYVDQVLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQT IPEVVYPGSFVLQVTARDKDQGPNGDVRYSLLKGKNSHSDWFSIDPVTGIITTAAALDFE SEPAPSVTVVAMDNGRPSLSSTAKVDIVLQDVNDNTPVFSSSFYNASIKENTPAGTCFLE VSATDEDRGSFGTISYTLGSGSGAVVPTHFTLDKETGQLCTSTALDRDEGLDKFDLTVTA MDGGGLSSVARVQVSVVDINDNRPTFYPVLYTVSLSTHSAPGTSVVKVTANDPDAGENGR VTYRTVPGGGSTFFTLNKDTGVISLSRSLHGKANTVISIVISAEDGGGLTAPVNARVNVS VVGGSVASPVFEQAQYFFTVAEDVLRGTAVGVVRAATKTGGAAKDIFYSISSGDPDGFFT VDSASGTIRTALPLDHETCSNLDLEIQARSGSPPAYGTSRVRITISDVNDNAPTFLPSSS ESLLLPEITKMGTVIYRIQATDKDSGHNGQLSFDLVSAGAAGSSGQRTFGVDRGSGEVRL IGSLSYENVPRYDLQVVAKDGGAPQLSSTFTLVVHIQAQDAQGPNFDTLTYRVELRENTP LNTRFLQVRALNREASGNGGSSSSSSSSSISYRLRPDGDAAGFGIMPDSGWLFVRSSLDR EVKDMYLLTVLATSGPGGTGRTGSATVRVTVTDENDNSPRLSQERVFLAVRENLLAGTGF GRVSATDRDAGLNARLTYRLLHTDRHFQINSQTGEISTRVALDREQQSSYQLVVVVQDGG TPPRSATGTAHITVLDENDHAPSFTHARPDRELLLQVMEGLPSGTVLGTVTAKDPDEGEN GTVYYSLSGSRVERFSLNPTNGELRTASPLRWAERAEYAFTVTAADHGTPGLSSTCQLRI QVLSSSRSNPKPNMLSMTLNTVEGAAPGSIIGSVRPHDKHESAILEGQVTYLVVGGTDRD GTFMVDRLKGDVYLVRELDYERGSRYTLQIEVSDFSQVFPSSYHVQLDINVQDSNDHTPQ FTEDPVTIVIPENIEPGASIYTFQAVDQDGSGPNSELHYSIEHYWPDTPDLLTLDPSSGV LTLGQKLDRESTPSLYLVVRATDQAVDASQRRWGSVTARVFVTDENDNAPVFSSPSAVSV MEDQPVGFVILYVMARDEDEGENGRVSYRIQTGNSAGRFSLNPNTGSLSILKTLDREEQE VFNLTIVAEDHGIPQLSTSQVLCVQVIDVNDEAPVFQRAEFETQVMENQGPGTTVLTVTA TDRDQGSNGQVTYGGVTEEGFIINPVTGVITTTKELDTEKQDHYTLTVYARDGGLPPNFA KAVVRVEVQDVNDNAPVFAKLWYGLEVPENQAPVELCFLKATDPDSGPGGELEYRITAGD PHGDFQLGTSTGALSTSRTLDRETRAEYTLEVVATDRGSPALSTTVTVQVKVLDVNDNSP IFSRSSYSVEVSEDAAEGTQVLEVTAIDADDDLNGKVLYFLSRETHGAFTVDENTGRITT AAPLDREKIASYSFQVFAVDLSPAAPRNSSAQVTVTILDVNDNTPFFIQDPLVIEVSSRR SQRVLATMKAEDKDFGANGSVFYRFAMPVRGFSINSLTGEIQATEPLGDLTQAQRTLIVE AMDQGSPAQSAQGVVVIYVKEVEYSGIRFSRNARDVSIQENAAKGTAVAQAQAQHPDGTR KGISYSLFSGNRKQAFSISSSTGEILVQSSKGLDFEDTPRLRLVVKAETVSSTSFMAINL ILQDVNDNLPRFQLQNYVAYMREAQGYEMPIIQVVAEDVDQGQNGQVTYSIQSSGMSGLF KIDPMTGSITTAAIMDREIFTQTKLVVTATDRGSPRLAGSATLTVIIIDQNDNSPTIPLP QEVRIPENTLIGTEITLVTGNDVDSSPALSYSLHLDPTALGKFGIHRYSGGVSLTAPLDF EEKTWYTVTVRATDSQHQTEANITILVEDINDNAPAFTHDLYQVTLPEHTPPGSAVVTVT ATDRDSGENGKITYRVMSSTQEGFYIDPNNGTLFISHRAEFDPERPSVSIVIEARDGGSP VLSSLTTVQVQISDVNDNAPVFHQSEYRATVAEDTIPGSTVLTFEAFDSDLSRENCGFDF AIANGNEGNAFQIESSVRFLEGRGFQTVGTLLLAEGLDFETQPLYNLTVVVSDRGVPQRS SSVAAVITIGDVNDNPPVFSRAEYTVSLSEGATAGTEIIRLTATDPDSTPNAEVQYTISS GDEVNLFTMDQWTGALRLQRALDREHQSTHVVIIQATDGQGHFALAPVIVEVKDINDNHP FFPVEVLTASIKENQPANSAVTVLHAIDHDTGVFGQLKYYMVERPRVGKDSFTVDQNSGE IRSKMPFDFEKVNSFNFVAIAVDSGNHSATVTVQVFVTGEDEYDPVFTSSDFNFEVPEGA KKGQSIGQVQANDEDGGVDGIVLYSLPAASPYFDVNKTTGAIFLKLDSSSSSSSGGSGRG KRETRLMTLEVKAHSPLDTSRTSTAQVSIDVTNTNFGLAPDVNILLISIIAVSLGFIILL VIMAVVVFLVKSRRRKKGQDTGNRTAASGTALQKLDECNSGPGGERIYHQALPGYAGDQG GAGGGPYTRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSG IQQDADQLSDISCEPAALEGSTWFKGKKLGGSLSGTLLSGQLPVYRDEGGGYLGVGRGLN ISLPKDYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARL KDETAQQSQNPRQPFQPKPKMDPKPRIDPPPLITSVAHPGAMSVPPKVPVIGRTFPHLAS LRRSPISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVTQGPSASMISTREPSLDQSP DHEMRI NT seq 9921 nt NT seq  +upstreamnt  +downstreamnt atgccggtaacaagtaaagggtcaagacggagggcttgggtcagtggaccctgcgtgtgt tcaagtccctggcggcgaacgccactcttctatttctgcatcgtccttgtccttattcag tctacaactgtccttggagcactggagctccagctggatgaagagcagcccgcggggacc attgttggggatatcagtgccgggttaccgcctggtgtaactgctagtttttacttcatc tcagaccatgaaggcacaggcgtcggcagcgatctcaacattgacgaaaccacgggcatc atcacgaccgcacgccgcctggaccgtgaggagagggaccactatagcttcatcgctgta acaatgacgggactcactatcgaggtgtcagtcactgtcaatgacatcaatgaccacgca cctgtgttccccaaaaagaaagctgtacttaagatccctgagcacacagaattggggaca aggttttccctggagcctgcgactgatgcagacaaggaccagttgactacccaaggctac gctataagagagggcaatgtgggccaggccttcagactggagaccaagagagctgcaaac aaggtgctgtatctggacctgatggtcaatggactgctggacagggagaaacgctcatcg tacaacctcgtcctggaggcctttgatgggggctcacctagaaggatgggatccatgagc ctggaggtgatcgtgactgacatcaacgatcatgcgccggtcttcaatcagagcagatac cacgctattatctctgaaagtcttccacaaggaagtagcatcctacaggtgtttgcaaca gatgaggatgagggcgataatggtctggtgctttatgaaatcaaccggcgtcagagtgac cctgaccgctactttgtcatggatatgaaatcaggggtcatcactttaaatagaccccta gattatgagctaaagagggtccatgaactggtggtccaggccagggataacgccagccac cctgaggtgaccaatgcgtttgtgaccatccatgtccgtgactacaatgacaaccagccc accatgaccatcatcttcctcagtgaggacggctctccaaggatctcagaaggagcccaa ccgggccagtacgtagctcgaatatctgtcaccgatccagactatggagagtacgccaac gtgaatgtgtccctcgaggggggtgatgggaagtttgctcttacaaccaaggacagcatc atttacctgatatatgtagaccaagtcttggatagagaggaacgggattcatatgacctc agggtgatggccactgactctggcacgcctcccctcagggcagagtcatctttcaccatc caggtgactgatgtcaatgacaacccccctctgtttgaccagcaggcctacagacaaacc attcccgaagttgtgtatcctggatcctttgttcttcaggtcaccgccagggacaaggac cagggccccaatggggacgttcgatatagcctcctcaagggcaaaaactctcattctgat tggttttccattgacccagtgacggggatcattaccactgcagccgctctggatttcgaa tcagagccagcccctagtgtgactgttgttgcaatggataacggccgcccgtcgctgtca tccacagcaaaggtggacattgtgctgcaggatgttaacgataacacacctgtgttctcc agcagcttctacaatgcctcgatcaaggagaacaccccagctgggacctgcttcttagag gtgtcagccacagatgaggatcgtggttcgtttggtaccatatcctacactctgggctcg ggctctggagccgtggtaccaacacacttcaccctggacaaggagacaggccagctgtgc accagcacggctctagaccgggatgaaggattggacaagtttgacttgactgttactgca atggatggaggtggtctgagctcagtagcccgtgtgcaggtctcagtggtggacattaat gacaaccggcccaccttttatccagtcctctacacagtcagtctcagtacccatagcgcc ccgggaacctccgttgtcaaggtaacagccaatgaccctgatgctggggaaaatggcagg gtgacctaccgcacagtacctggaggaggctccacgttcttcaccctcaacaaggacaca ggtgtgatttccctctctcgctcgcttcatggcaaagcgaacacagttatctccatagtg atatcagctgaggatggtggtggtctgacggctccagtcaatgccagggtgaacgtgagc gtggtgggaggctcagtggcgtctcccgtgtttgaacaggcgcagtatttcttcactgtg gccgaggacgttctcagggggacagcggtgggagtagtccgtgctgctaccaagacaggt ggtgctgctaaagatatcttctactccatctcttccggagaccctgatggtttcttcaca gtggacagtgcttctggcacaattcgcacagcccttcctttggatcatgagacctgctcc aatcttgacctggaaatccaggcacgctccggctctcctccagcttatgggaccagccgc gtacgaataaccatttcagatgtcaatgacaacgcccccaccttccttccctcatcatca gagtccctccttttacccgaaatcaccaaaatggggactgtcatctaccgcattcaggcc acagacaaggattctggtcataatggtcagctcagcttcgacctggtctctgctggggct gcaggcagcagtggccagaggacgtttggagttgaccggggaagcggggaggtacgtctg attgggagtctgtcgtacgaaaacgtcccacgctatgaccttcaggtggttgccaaggat ggtggagcacctcagcttagttccactttcacccttgtggtccacatccaagcacaagat gcacaaggccccaactttgacaccctgacctacagagtggaactacgtgaaaacacaccc cttaacacacgtttcctccaggtacgagcactcaacagagaggcctctgggaatggtggg agctcctcctcttcctcttcctcctctatttcctaccgccttaggcctgatggtgatgct gccggttttggcatcatgccagatagtggttggctttttgtccgtagctctctggaccga gaggtcaaagacatgtacctgctgactgtcctggccacctcgggcccaggagggacgggg agaactggcagtgccacagtcagggtgaccgtgaccgatgagaatgacaattcgcccaga ctgagccaggagagggtgttcctggctgtcagagagaacctactggctgggacaggcttt ggaagggtgtctgcgacagacagagatgcgggactaaatgctcgactcacctataggctg ctgcacactgacagacactttcagatcaactcacaaacaggcgagatcagcacccgtgtt gccctggacagagagcagcaatcaagttaccagctcgttgtggttgtacaggatgggggt acgccccctcgcagcgctactggcacagcccatatcaccgtgctggatgaaaatgatcac gccccaagcttcactcatgccaggccggacagagagctgctgcttcaggtgatggagggg cttccatctgggacagtcttggggacagtgacagctaaagacccagatgagggagagaat gggactgtgtactattctttatcaggctccagagtagagcgcttctcccttaatccaacc aatggcgagctgagaaccgcttcccctctgagatgggcagagcgagccgaatatgccttc actgtgactgctgctgaccacggcacaccaggcctcagctccacctgccagctacggata caggttctcagctcctccaggtccaaccccaagcccaacatgctctcaatgaccctgaac acagtcgaaggagctgctccaggctccatcattggctccgtgcgccctcatgacaagcat gaatctgctattttggaaggccaggtgacctacctggtagtcggggggacagaccgggat gggactttcatggtggaccgtttaaagggcgacgtgtatctggtacgcgagctggactat gagagggggtcgaggtacactctgcaaattgaggtgtctgacttctcccaagtgtttccc agcagctaccatgtgcagctggatatcaatgtgcaggatagcaatgaccacaccccacag ttcacagaggaccctgttaccattgtaatcccagagaacatagagccaggggcttccata tataccttccaggctgtggatcaggatgggagcggacccaacagtgagctgcattactcc attgagcactactggcctgacacacctgacctcctgacccttgacccctccagtggagtc ctgacccttggacagaagttagatcgcgaatccacaccctccctctaccttgtggtgcgg gccacagatcaggcggtggacgcctctcagagacgctggggttcagttactgcccgtgtg tttgtgacagacgaaaatgacaacgctcccgtcttcagctctccatctgcagtcagtgtc atggaggaccagcctgtggggtttgtgattttatatgtgatggctcgagatgaagatgaa ggagaaaatggccgggtgtcatacagaatccagacaggcaacagtgctggtcgctttagt ctgaaccccaacactggctctctctccatcctcaaaaccttagaccgggaagagcaggaa gtcttcaatcttaccattgttgcagaggatcatgggatacctcagctatccacctctcag gtgctgtgtgtgcaggtgattgatgtgaatgatgaagctccggtgttccaacgagcagag tttgagacccaggtgatggaaaaccaaggaccaggaacgacagtgttgacggtgactgcc actgacagggatcaaggctctaatggccaagtgacgtatgggggtgtgacagaggaaggc ttcatcatcaaccctgtgacaggagtcatcaccaccactaaggaactggacacagagaaa caggatcactacactctcactgtgtatgccagggacggagggctgcctcctaactttgcc aaggctgtggttcgtgtggaggtgcaggatgtgaacgacaacgctccggtctttgcaaag ctatggtatggactggaggtgccagagaaccaggcccctgtagagctttgctttctcaag gccacagaccctgactcaggtcctggtggagagctggagtacaggattactgcgggagac cctcatggagatttccaacttggcaccagcacaggagccctgtctacctcgcgcacccta gacagggagacgagggcagagtatactctggaggtagtggccacagaccggggcagccct gccctcagcactactgtcacagtgcaagtcaaagtgctggatgtcaatgacaacagcccc atcttcagcagaagtagctactctgtggaagtgtcagaggacgctgcagagggcacacaa gttttggaggtgacagccatagatgctgatgatgacctgaatgggaaggttctgtatttc cttagccgagagacacacggagcttttactgtggatgagaacactggtcgtatcaccaca gcagcacctctggacagggaaaaaattgcatcatacagcttccaggtgtttgctgttgac ctttcacctgctgcaccaaggaacagctctgctcaggtgacagtcaccatcctggatgtc aacgacaacactcccttcttcattcaagatccgctggtcattgaagtgtccagcaggcgt tcccagcgggttctagccacaatgaaggccgaggacaaggactttggagccaacggttct gtgttttaccgtttcgctatgccggtgaggggatttagcatcaactccctgactggggag atccaggcaactgagccactgggagatctgacccaggctcagaggacattgattgtggag gccatggaccaagggagcccagctcagtctgcacagggtgtggtggtgatttacgtgaag gaggtggagtacagtggcattcgcttctctaggaatgccagagatgtcagcatacaggag aatgctgcaaaaggcacagctgtggctcaggctcaggctcaacacccagatggcacacgt aagggtatcagctacagcctcttcagtgggaacagaaagcaggccttcagcatcagctcc tcaacaggtgaaatcttggtgcaaagctccaagggtctggactttgaggacacccccaga ctccgtctagtcgtgaaagctgaaaccgtgtcctccacatcatttatggctattaacttg atcctgcaggatgttaatgacaaccttcctcgctttcaactgcagaattatgtagcctac atgagagaggcacagggatatgaaatgccaatcatacaggtggttgctgaggatgtggat cagggccaaaatggtcaggtgacctattccatccagtcatcaggcatgagcggcctgttc aagattgacccgatgacaggaagcatcaccacagcagccatcatggaccgtgagatcttt acccagaccaagctagtggttacagcaactgatagagggagtccaagactggctggttcg gccacattgactgtgatcattattgaccagaatgacaacagtcccactattcccttgcct caggaagtccgcattccagagaatacgttgattggcacagagatcactcttgtgacaggt aatgatgtcgactccagtcctgctctctcctactccctacatctagacccaacagcctta ggcaagtttgggattcaccgatacagtggaggcgtgtcactcactgcccctctggacttt gaggagaagacatggtacaccgttactgtcagagccacagacagccagcaccaaactgag gctaacattacaatactggtggaggatattaatgacaatgcacctgcattcacccatgat ctttaccaggtaactctgccagagcacacaccaccaggaagtgcggttgtcacagtaact gcaactgatagggactctggagagaacggaaagatcacctacagagtgatgtcatcaacc caggagggtttctatattgaccccaacaacggaaccctgttcatcagtcacagagctgag tttgaccctgaacgtccatcagtcagtattgtcattgaagctcgtgatggaggctcgcca gtgctctcgtccctgactacagtgcaggttcaaatctctgacgtcaatgacaacgctcct gtgttccatcagtctgagtacagggctacagttgctgaggacaccattccagggtcaaca gtattgacttttgaggcctttgacagcgacctctctcgagaaaactgtggctttgacttt gctattgccaatggaaatgaaggaaatgcgttccagatcgaaagcagtgtgcgcttcctg gaggggcggggctttcaaactgttgggactctgctgttggctgaggggctcgactttgaa acccagccactttacaacctcactgtggtagtgtcagaccgcggcgtgccccagaggagc tctagtgttgctgcggtgataaccattggtgatgtgaatgataaccctccagtgttcagc agagcagaatatacagtgtcactaagtgagggagctactgctgggactgagatcatacga ctgactgctacagatcctgactcaactcccaatgctgaggtccagtatactatcagctct ggtgatgaggtgaacttatttaccatggaccagtggactggagctttgaggcttcagcga gcactcgatcgtgagcaccagtccacacatgttgtcatcatccaggctacagatggacag ggacacttcgcgctggctccagtcattgtcgaggtcaaagacattaatgacaatcatcca ttcttccccgtggaagtcctgacagcaagtatcaaagaaaaccaaccagcaaactcagct gtgactgttctccatgccatagatcatgacacaggggtttttggccagctaaagtactac atggttgaacggcccagggtgggaaaagacagcttcacggtggaccagaactcaggagaa atcagaagcaaaatgccctttgactttgagaaggttaactcctttaactttgtagcaatt gcagtggattcaggcaaccactcagccactgtgactgtgcaagtgtttgtcactggtgag gatgagtatgacccagtcttcacatcctctgatttcaactttgaagttccagagggagcc aagaaaggtcagagcatcggtcaggttcaagcaaatgatgaggatggaggggtggatggt attgttctctattctcttcctgccgcctctccatactttgatgtaaacaaaaccactggg gcgattttcctcaagctggacagctcaagcagcagtagtagtggtgggtcaggacgtggc aaaagggaaaccaggctgatgactcttgaagtgaaagcacacagtcctctggatacatct cgcacctctacagcccaggtctccatcgatgtcacaaataccaactttggcctggctcct gacgtcaacattctgttgattagcatcattgccgtgtcccttggtttcatcatattgctt gtgatcatggccgtggtggtgttcctagtcaagtcacgcaggagaaagaaagggcaggat acaggaaacagaaccgctgcctcaggaactgctctgcagaaactagatgaatgcaactca ggacctggaggagaaaggatataccatcaggccttgccaggctatgctggagatcagggt ggtgctggtggaggtccctacactagagggggctctctggatccctctcactccagtgga agaggatcagctgaggcagcggaggatgatgagattaggatgataaacgagtacccccgt gtcgcctccatcacctcatccatgcaggagcacatctcggccagaggaccagactctgga atacagcaggacgctgaccagctctctgatatctcctgtgaacccgcagctttggagggc agcacctggttcaaaggaaagaaacttggaggcagtctcagtgggaccttgctctctgga cagctcccagtctacagggacgagggaggtgggtacctgggagtaggccgtggcctcaat atttccctgcccaaggattatgccttccccgaggacggtaaaccttcagtggatggttcc ctcacagctatcgttgccagtgatgaggagctccgtggaagctataactgggattacctg cttaactggtgcccacagttccagcctctggccaacgtcttcacagagattgccaggctg aaagatgaaactgctcagcagagccagaaccctcgccaacccttccagcccaagcccaaa atggatcccaaacctagaattgatcctccaccactcatcacatcagtggcccacccaggg gccatgtcagtcccacctaaggtccctgtgattggaaggacattcccacatttggcctca ctccgtaggtcccctatcagtcatgagggatccatttcatcagcagcaatgtcccccagc ttctccccatctctgtcccctctggcagctcgatctccagctgtttctccctttggagtt acccaagggccctcagcatcaatgatcagcaccagggagccctcgctggaccagagtcct gatcacgagatgagaatatga

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