Lates calcarifer (barramundi perch): 108894766
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Entry
108894766 CDS
T04895
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00514
Other types of O-glycan biosynthesis
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108894766
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108894766
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108894766
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
108894766
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108894766
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
108894766
NCBI-ProteinID:
XP_018548887
UniProt:
A0A4W6FGF2
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Position
LG5:5560488..5569519
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AA seq
357 aa
AA seq
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MWKSTGGPKSTFTSAAGPRATAAAVTCLLVTGTLVVAVGHPSSGVPEEPPAAAASGKVFS
AYFRKLTRERRAMSGPPRSSAPPGPVEHLTPADLFIAVKTTGRYHRQRLELLLDTWLSRN
MQQTYVFTDGEDKELRKRMGGHLINTNCSAAHNRQALSCKMALEYDTFLNSGKKWFCHVD
DDNYVNVGSLLKLLSQYSHTQDVYIGRPSLERPIEATERLGTAEMKQVRFWFATGGAGFC
LSRGLALKMKPWASDGTFMATAEHIRLPDDCTVGYIVEALLGVSLIRSALFHSHLENLGL
VSDIHNQVTLSYGTVENSRNTVNVKGPFSVNEDPTRFRSVHCLLYPDTPWCPSPRRL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaatccaccgggggaccaaaaagcaccttcacctcagcggcgggacctcgcgct
accgccgccgcggtcacctgtctgctcgtgaccgggacgctcgtcgtcgcggtgggacac
ccgagcagcggagtcccggaggagcctccagctgcagcggcgagcggaaaagttttctcg
gcgtatttcaggaaactgacccgggagaggagagcgatgagcggccccccgcgaagcagc
gctccccccggaccggtggagcatctgaccccagccgacctgttcatagcggtgaaaaca
actgggaggtatcaccggcagagactggagctgctgctggacacctggctctccaggaac
atgcaacagacgtatgtgttcactgatggagaggacaaggagctgaggaaaaggatggga
ggtcacctgatcaataccaactgttcggcagcccacaatcgtcaggccctctcctgtaaa
atggctctggagtatgacacttttcttaactctggcaagaagtggttctgtcatgtcgat
gacgataactacgtgaacgtcggctccctcctgaagcttttgtctcagtacagtcacacg
caggacgtttacatcggccggcccagcctcgaacgaccaatagaggccacggagaggctc
ggcaccgctgagatgaagcaggttcgtttctggttcgccacaggaggagcagggttctgt
ctgagccgtggcctcgcactcaaaatgaaaccctgggcgagcgatggcactttcatggca
acagcggagcacattcgcctccctgatgactgcaccgtcggttacatcgtggaggcgctg
cttggcgtgagcctcatccgctcagctttgttccactctcacctggagaacctgggactg
gtgtcagacatacacaaccaggttactctgagctatggcactgtggaaaacagcagaaac
actgtcaatgtgaaaggcccattttcggttaatgaagatcctacaaggttcaggtctgtc
cattgtctgttgtacccagacactccttggtgccccagcccccggcgactttaa
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