Lates calcarifer (barramundi perch): 108894856
Help
Entry
108894856 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2-like
KO
K02577
heparan sulfate N-deacetylase/N-sulfotransferase NDST2 [EC:3.5.1.-
2.8.2.8
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf01100
Metabolic pathways
Module
lcf_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108894856
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108894856
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.8 [heparan sulfate]-glucosamine N-sulfotransferase
108894856
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108894856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSNSD
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
108894856
NCBI-ProteinID:
XP_018548995
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MLLQHRMDFWWFPHMWSHMQPHLFHNVSVLAEQMRLNKIFAQEHGIPTDMGYAVAPHHSG
VYPVHSQLYEAWKSVWGIKVTSTEEYPHLRPARYRRGFIHNGIQVLPRQTCGLFTHTIFY
NEYPGGSKELDKSIRGGNXLLTVLLNPISIFMTHLSNYGNDRLGLYTFESLVKFVQCWTN
LRLRTLPPVKLAEKYFQIFPEERDPLWQNPCHDKRHKDIWSKEKTCDRLPKFLVIGPQKT
GTTALHSFLSLHPAITSSFPSPTTFEEIQFFSGANYDNGIDWYMDFFPFPSNVSTDFMFE
KSANYFDTEVASKRAAALLPRAKILAVLINPADRAYSWYQHQRAHQDPAAINNTFHLVVT
AGPSAPKDLLALQRRCLNPGAYATHLERWLQHYQPSQLHIVDGALLRTNPALVMEGIQRF
LGVTPIFNYTQALMYDDSKGFWCQRVEGGRAKCLGKSKGRKYPEMSPESRAFLAEYYREH
NMELLRLLNRLGQPLPSWLRQELQSTSWS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcaacacagaatggacttttggtggtttcctcacatgtggagccacatgcag
cctcacctctttcacaatgtcagtgtcttagctgagcagatgaggctcaacaagatcttt
gctcaggagcatggtatcccaacagatatgggctatgccgtggctccacaccactctggg
gtttacccagttcacagccagctctatgaggcctggaagtctgtgtggggcatcaaggtg
accagtacagaggaatacccccatctgaggccagctcggtaccgccgtggcttcatccac
aatgggatccaggtgttgcctcggcagacctgtggtctgttcacacatacaatcttctat
aatgaatacccaggaggctcaaaggaactggacaagagtatcagaggggggaacnntctc
ctcacggtcctcctaaaccctatcagtatcttcatgacccacctatctaattatggcaac
gacaggcttggtctctacacctttgagtctttggtgaagtttgtccagtgttggactaac
ctcaggctgaggacattgccccccgttaagctcgctgaaaaatacttccagatcttccct
gaggaaagagacccactctggcagaacccttgtcatgacaagagacacaaagatatctgg
tctaaagaaaaaacttgtgacagacttcccaagttcctcgtcattggaccacagaaaaca
ggcactacagcacttcattcattcctgagcctccacccagcaattaccagttctttcccc
agtcccaccaccttcgaggagatccagttcttcagtggagcaaactatgacaacgggatt
gactggtacatggatttcttcccattcccttctaatgtcagcacagatttcatgtttgaa
aagagtgccaactactttgacacagaggtagcttctaaaagagctgctgccctgctacct
agagccaaaatcctggcagtgctcatcaacccagctgacagagcttactcctggtaccag
caccagagggcccatcaggaccctgcagccatcaacaacactttccatttagtggtgaca
gcaggcccttcagcccccaaggacctgctggcccttcagagacgctgccttaacccaggg
gcctatgctactcacctggagcgctggctgcaacactaccagcccagccagttgcacatt
gtggatggagccctgctgcggaccaacccagctctggtgatggagggaatccagagattc
ctcggtgtcactcccatcttcaactacacccaggctctaatgtatgatgacagcaaaggt
ttctggtgtcagcgagtggaaggaggtcgagctaaatgcctggggaagagtaaaggcagg
aagtacccagagatgagtcctgagtcgcgtgcctttctggctgagtactaccgtgagcac
aacatggagctgctgcgtctgctcaatcgactgggacaaccgctgccatcctggctccgc
caagaactccagagcaccagctggagctga
DBGET
integrated database retrieval system
