Lates calcarifer (barramundi perch): 108896845
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Entry
108896845 CDS
T04895
Symbol
vegfab
Name
(RefSeq) vascular endothelial growth factor Ab isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04370
VEGF signaling pathway
lcf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108896845 (vegfab)
04370 VEGF signaling pathway
108896845 (vegfab)
04020 Calcium signaling pathway
108896845 (vegfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108896845 (vegfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108896845 (vegfab)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108896845 (vegfab)
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Growth factors (RTK binding)
108896845 (vegfab)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108896845 (vegfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VEGF_C
PDGF
Motif
Other DBs
NCBI-GeneID:
108896845
NCBI-ProteinID:
XP_018551629
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All DBs
Position
LG7_1:complement(13797478..13812401)
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AA seq
240 aa
AA seq
DB search
MFENKSPHLASWILKRRLPLHWISNTMNFIDSLTLLFLTLSAVKSAHIPRETERGPHDVI
PLMEVYNKSLCQPRELLVEILQEYPEEVEHIFIPSCVVLTRCAGCCNDEMLQCMPTSTYN
ITMEIKRIKPQRQQNDIFMSFTEHSACECRLKKEVKEQREKKSRKGKGKGQKRKRKKNSD
KTIHDAVCEPCCDQCSERRKRLFVQNPVTCRCSCKHTDEYCKERQLELNERTCKCDKPRR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacaaatcgccacatttggcctcttggattttaaaacgtcgcctgccttta
cattggatttccaacaccatgaactttattgacagtttgacactattatttttgacgctg
tcagctgtcaagagtgcccacataccgagggaaacagaaagaggtccacatgacgtgatc
cccttaatggaagtgtacaacaagagtttgtgtcagcctcgggagctgctggtggagatt
ctgcaggagtatccggaggaggtggagcacatcttcatcccatcctgcgtggtgttgacg
cgctgtgccggctgctgcaatgacgagatgctgcagtgcatgccaacgtccacctataac
ataacaatggagattaaaagaataaaaccccaaaggcaacaaaatgatattttcatgagt
tttacagaacacagcgcatgtgagtgtaggttaaagaaagaagtgaaagaacagagagaa
aaaaaatcccggaaaggcaagggtaaaggccaaaagagaaaacgaaagaaaaacagtgac
aaaacaattcatgatgctgtttgtgagccatgttgcgatcaatgctcagagaggaggaag
cgtttgttcgtgcagaatccagtaacctgtcggtgctcctgcaaacacacagacgaatac
tgtaaagaacgccaactagagctcaacgagaggacctgcaaatgtgacaagccaagaaga
tga
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