Lates calcarifer (barramundi perch): 108897286
Help
Entry
108897286 CDS
T04895
Name
(RefSeq) tumor necrosis factor receptor superfamily member 6 isoform X1
KO
K04390
tumor necrosis factor receptor superfamily member 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04115
p53 signaling pathway
lcf04210
Apoptosis
lcf04217
Necroptosis
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108897286
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108897286
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108897286
04217 Necroptosis
108897286
04115 p53 signaling pathway
108897286
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108897286
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108897286
04090 CD molecules [BR:
lcf04090
]
108897286
Cytokine receptors [BR:
lcf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108897286
CD molecules [BR:
lcf04090
]
Proteins
108897286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
CD34_antigen
Psg1
GAPT
Motif
Other DBs
NCBI-GeneID:
108897286
NCBI-ProteinID:
XP_018552353
UniProt:
A0A4W6CRW9
LinkDB
All DBs
Position
LG16_LG22:10635639..10640193
Genome browser
AA seq
324 aa
AA seq
DB search
MMAFDSKNVLAWFIACDLLCSCLLQAYHFASSQTEGKETRFPIKALLRHRRQTCEDGTYE
HEGKPCCLCGAGLKLESHCLKSIDDRQCSPCEQGEYHSQPNFQPQCDPCTSCEHPNANLE
VEEPCTRARDTKCRCKKNHFCSDPGACKICQPCRECHDEGVKVPCTAKNNTVCNDKIEGG
NTGTIIAIIVPILLIALLALIGLWCWRKRKSQGKTLVHQPNINMELEPLEVSDIEPHLSD
IAEELGWKDMKDVAIRCGIPPARIESCELNHRGDAQEATLELLRIWVEREGSGAGRKLIQ
ILQNSNKKRKAEKVTDILRIDCAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgttcgattcaaaaaacgttcttgcatggtttatcgcctgtgatctgctctgt
tcctgtctgttacaggcgtatcatttcgcctcatcccaaactgaagggaaagaaactcgg
tttccaattaaagcactactacgtcacagaaggcagacttgtgaggatggcacctacgag
catgaagggaagccctgttgtctgtgcggtgctgggttgaagttggagagtcactgcttg
aagagtatagatgatagacaatgcagtccctgtgaacaaggagagtaccacagtcagcct
aatttccagcctcaatgtgacccctgcacatcctgtgaacaccccaatgccaacctagag
gtggaggaaccctgtacccgtgccagggacactaaatgtcgatgtaaaaagaatcacttt
tgcagtgacccaggagcttgcaaaatctgccaaccctgtagagaatgtcatgatgaaggt
gtcaaagtaccctgcacagccaaaaataacacagtctgcaatgacaaaattgaaggggga
aatactggaacaataattgccataattgtcccaattctactcattgctttattagcttta
ataggactgtggtgttggagaaagagaaaatcgcaggggaagaccttagtccaccaacca
aatatcaacatggagttggagcctcttgaagtttcagatatcgagcctcacctgtctgac
attgcagaagagcttggatggaaggatatgaaggacgtagcaattcgttgtgggatacca
ccagctagaattgagtcttgtgaactgaaccaccgcggtgatgctcaggaggcgactttg
gaactactacggatctgggtggagagggagggcagtggtgctggacgaaaattaatccaa
atcctacagaatagtaacaaaaagcgcaaagcagagaaggtgacagacatattgcgtatt
gattgcgctgcctaa
DBGET
integrated database retrieval system
