Lates calcarifer (barramundi perch): 108897819
Help
Entry
108897819 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily KQT member 4
KO
K04929
potassium voltage-gated channel KQT-like subfamily member 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108897819
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
108897819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KCNQ_channel
Ion_trans
Ion_trans_2
DUF6526
Motif
Other DBs
NCBI-GeneID:
108897819
NCBI-ProteinID:
XP_050922584
LinkDB
All DBs
Position
LG3:10836786..10882422
Genome browser
AA seq
682 aa
AA seq
DB search
MLGSPSNNGGIRMLAPPAPNDDRRVEFVALTAVHTERSEPSTPERGHPSHRTGLLGTPLP
GPPGPRANSSASSKRYRKLQNCLYNVLERPRGWAFIYHAFIFLLVFSCLVLSVFSTIPEH
QKMANQGLFILEFVMIVVFGLEYFIRIWAAGCCCRYRGWQGRLRFARKPFCVIDFIVFVA
SLAVIAAGTQGNIFATSALRSMRFLQILRMVRMDRRGGTWKLLGSVVYAHSKELITAWYI
GFLVLIFASFLVYLAEKDVNTDFNTYADSLWWGTITLTTIGYGDKTPHTWQGRLLAAGFA
LLGVSFFALPAGILGSGFALKVQEQHRQKHFEKRRMPAANLIQAAWRLYSTDAKHSYLTA
TWYFYDSMLPSFRELTLLFSHLQRQRNNKKVLHNSYHTLLSGLRPYSSPYLSGDSSKMGF
RDRIRMNNSRSSQTIRNKASPLPPGSGVRRSPSQENVPEATSPGKVQKSWSFNDRTRFRT
SLRLKPRSPADVEGVGEDSVEDKPYCDVAMEEVIPAVKTLIRAVRILKFLVAKRKFKETL
RPYDVKDVIEQYSAGHLDMLGRIKSLQMRVDQIIGRGAVQPDKKARPEKGEKTPPELDPL
DELSMMGRVVKVEKQVQSIENKLDLLLNFYSQCLKKGSSHLTLSSLLEPDLTSDYHSPTD
QRDLFPSANTLNISQSESGNLE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgttaggaagtccgtccaacaacggcggcatcagaatgctggcgcccccagctccgaac
gacgacaggcgggtagagttcgtcgctctcaccgctgtccacacggagagaagcgagccg
tccaccccggagcgaggacacccgtcacaccgcacgggtctgctgggcaccccgctgccc
ggcccgcccggtccccgggccaactcgtccgcctcaagcaagcgctacagaaagttgcaa
aactgcctgtacaacgtgctggaaagaccacgaggatgggcattcatctaccatgcattc
atttttctgctggtgttcagctgcttggtgttgtctgtgttctccaccatccccgaacac
cagaagatggccaaccaaggcctcttcatcctggagtttgtgatgattgtggtgtttggg
ttggagtacttcatcaggatctgggcggccggctgttgctgccgataccggggatggcag
ggacgactgagatttgccagaaagcctttctgtgtcatagacttcatagtgtttgtggcg
tcactggcagtgatcgctgcaggcacgcagggtaacatctttgccacctcagccttgcga
agcatgcgtttcctgcagattttgcgtatggttcgtatggaccgacgaggaggcacctgg
aaactactgggctcagtggtttacgctcacagcaaggagttgattacagcctggtacata
ggcttcctggtcctcatctttgcctccttccttgtgtacctggcagagaaagacgtcaat
acagatttcaacacctatgcagactccctctggtgggggactattactctgactactatt
ggctatggtgataagactcctcatacctggcaaggacggctcctagctgcaggttttgct
cttctgggagtctccttctttgccttgcctgctggaattctggggtcaggctttgccttg
aaggttcaagagcagcaccggcagaagcactttgagaagagaaggatgcctgctgccaac
ctgatacaggctgcatggcgtctctactctacagatgccaaacactcctatctaacagct
acatggtacttctatgacagcatgctgccttcattcagagaactgacgctactgttcagt
cacctccagcgacagcgtaacaacaagaaggttctccacaactcctaccacacgctgctg
tctgggctgcggccctacagctccccctacctgtcgggggacagcagtaaaatgggcttc
cgggatcggatcaggatgaacaattcccgatcatcccaaaccattcggaacaaggcgtca
ccgctgcccccgggctccggtgtccgacgctctcccagccaggagaacgtccctgaggcc
accagccctgggaaggtccagaagagctggagctttaatgaccgcacacgcttccgcacc
tcgcttcgcctcaaaccacgatcccctgctgatgtggaaggggttggggaggacagcgtg
gaagacaaaccatattgtgatgtggccatggaggaggtaatcccagcagtgaagacactt
atacgagctgtcagaatcttaaagttccttgtggccaagaggaaatttaaggagacgttg
cgtccatatgatgtgaaggacgtcatagagcagtactccgctggacacctggacatgctg
ggccgcatcaagagcctgcagatgcgagtggaccagataattggacgaggagctgttcag
cctgataaaaaggcacgccctgaaaaaggagagaagacgccgccagaactggacccactg
gatgagctaagcatgatgggacgtgtagtcaaggtggagaaacaggtacagtccatagag
aataaactggacctcttgctcaatttctactcccagtgcctaaagaaaggctcatcccac
ttaaccctgtcctccctcttggagcccgacctgacatctgactaccacagccccacggac
caaagagacctcttcccctccgctaacacgctcaacatctcccagtctgaaagcggcaac
ttggaatga
DBGET
integrated database retrieval system
