Lates calcarifer (barramundi perch): 108898298
Help
Entry
108898298 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: NEDD4-like E3 ubiquitin-protein ligase WWP1
KO
K05633
NEDD4-like E3 ubiquitin-protein ligase WWP1 [EC:
2.3.2.26
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108898298
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108898298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108898298
04121 Ubiquitin system [BR:
lcf04121
]
108898298
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108898298
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108898298
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
HECT type E3
108898298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
108898298
NCBI-ProteinID:
XP_018553765
LinkDB
All DBs
Position
LG24:1598561..1620836
Genome browser
AA seq
961 aa
AA seq
DB search
MATASSRAESSHNHRGTSQLYAIVSCAKIKRKKSLFGTTIYVEVTAEGESRRTAKSHSSS
SPKWDERLTLNVTPHTQVDFKVWSHHTLKADALLGKVTLDLMQALEQHDRKLENVKEVLK
LSVEQKGVLVPAGELTVYLDGLTVTDQEELAPLTNGNAANGTKVQQNGDAIHENGDSSSS
SSRAANSTVNGTDLGPRSDSCSASNGVDGQVLSSSCSPALGHVVNGDSTPNSTPVHQPSD
SDTESRTVNGESCDAAALGPSSVTTGDVPPPADDHEDSSQDTIPSDSVTAPNSTSQPPPP
STHAPASSSAAKPPDGTASAAAPASSSTPTSTAQSATTTITTSTSSSSSPAQGEANASGA
AGGSSSNSATVTTDGAKPRQQVPNAGASDPLPPGWEQRKDPHGRTYYVDHNTRTTTWERP
QPLPPGWERRVDDRGRIYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMHQFNQR
YLYSASMMSAENDPLGPLPPGWERRVDSNDRVYFVNHNTKTTQWEDPRTQGLQNEDPLPE
GWEIRYTREGVRYFVDHNTRTTTFSDPRTGKSSVTKGPQIAYERSFRWKLAHFRYLCQSN
ALPSHVKITVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSH
EVLNPMYCLFEYAGKSNYCLQINPASAINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLP
FYKRMLNKKLILKDLESIDPEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKITSHDLKP
DGANVLVTEENKEEYISLMAEWRFSRGVEGQTKAFLDGFNEVVPLQWLQYFDEKELEVML
CGMQEVDLQDWQRNTVYRHYTRNSKQIIWFWQLVKEVDNEVRLRLMQFVTGTCRLPLGGF
AELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSFEQLKEKLLFAIEETEGFGQ
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcctcatccagagcagagtctagccataaccacagaggaacgtcacagctt
tatgccattgtttcctgtgccaaaatcaagaggaagaaaagcctgtttgggactaccatt
tatgtggaggtgacagcggagggggagtcgcgccgtacagcaaagtctcacagctcctcc
agtcctaaatgggatgagaggctcactctgaatgtaacaccgcacacacaggtggatttt
aaagtatggagtcaccacaccctgaaagcagacgctctgctgggcaaagtcacactggac
ctaatgcaagccttggagcagcatgacagaaaattggagaatgtgaaggaggtgctgaag
ctgagcgtggagcagaagggagttctggtgcctgcaggggagctcaccgtctacctagat
ggactgactgtcacagaccaggaggagctggcaccgcttaccaacggcaatgcagcaaat
ggcaccaaagtccaacagaatggtgatgccatccatgaaaatggagactcatcgtcctcc
tcttcaagggctgccaacagcacagtgaatggcaccgacttgggcccaaggtcggattcc
tgttcagcctccaacggtgtggatggtcaggtgctttccagttcctgcagccctgctctt
ggtcatgtcgtcaatggagactccacacccaactccaccccagtccaccaaccctcagac
agtgacacagagagtaggacggtcaacggggagtcctgtgatgcggctgctcttgggccg
tcgtctgttacgacaggtgatgtgccgccccctgcagatgaccacgaggatagcagtcaa
gacaccatcccgtcagactctgtcacagcaccaaatagcacatctcagcccccaccaccc
tccacacatgctccagcatcctcctctgctgctaagcctcctgatggcactgcttccgct
gctgctcctgcttcctcctccacacccacctccacagcccagtcggctaccaccaccatc
acaacctctacgtcatcgtcctcctccccagcacagggagaagcaaatgcttcaggagct
gctggtggtagcagtagtaacagtgcaactgtaactacagatggggccaagcccagacag
caggttcctaatgccggggcctcagatcctctgccaccaggatgggagcagaggaaagac
ccgcatgggagaacgtactatgtagaccacaacaccaggactactacttgggagagacca
cagccactaccaccaggttgggagcgtcgagtggatgaccggggcaggatctattatgtg
gaccacaacacccgcaccaccacgtggcagcgtcccactatggagtcagtccgcaacttt
gagcagtggcagagccaacgcagccaactgcagggagctatgcaccagtttaaccagaga
tacctctactctgcatccatgatgtctgctgagaacgatcctcttggcccactacctcct
ggttgggagagacgtgtggactctaatgaccgagtgtactttgtcaaccacaataccaag
acaacgcagtgggaagacccccgaacccaagggctacagaacgaggaccctctgcctgaa
ggttgggagatccggtacacgagggaaggggttcgctactttgtggatcacaacacccga
accaccacgttcagtgacccccgcactggaaagtcctctgtcaccaaaggcccacagatc
gcttatgagcgcagcttcagatggaagcttgctcattttcgctacttgtgccagtccaac
gctctccccagccatgtgaagatcaccgtctccagacagacgttgtttgaagactctttc
cagcagattatggccctgaagccttatgacttgaggaggagactctatgtcatcttcaga
ggagaggagggtctcgactatggtggcttagcccgagagtggttcttcttgttatcccat
gaagtgttgaaccccatgtactgtctgtttgaatacgccggcaagagcaactactgtctg
cagatcaacccagcctcagctatcaatccagaccacctctcctacttctgcttcataggc
cgcttcattgcaatggcacttttccacggcaagttcatcgacacaggcttctctctgcct
ttctacaaacgcatgctgaacaagaagctcatcctcaaagatcttgagtccattgacccg
gagttttacaactcactcatatggatcagggacaacaacattgaagagtgtggtctggag
atgtacttctcggtcgacatggagatcttggggaagatcacgtctcatgacctcaaacct
gacggtgccaacgtcctggtcactgaggagaacaaggaggagtatatcagtctcatggca
gagtggaggttctcccggggggtcgaaggtcagaccaaagctttcctggatggtttcaat
gaggtggttccactgcagtggctccagtactttgatgagaaggagctggaggtgatgctg
tgtggcatgcaagaggtagacctgcaggactggcagaggaacactgtgtaccgtcattac
accaggaacagtaaacagatcatctggttctggcagctggtgaaagaagtggacaacgaa
gtgcgactgcggctcatgcagtttgtcactggaacctgcaggcttcctctgggcggcttc
gctgaactcatgggaagtaacgggccccagaagttctgcatcgagaaggtggggaaggac
acgtggcttcctcggagccacacgtgttttaaccgtctggacttgcctccctacaaaagc
tttgagcagctgaaagagaagctgctctttgccatcgaggaaactgaaggattcggtcaa
gaatag
DBGET
integrated database retrieval system
