Lates calcarifer (barramundi perch): 108898651
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Entry
108898651 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-10-like
KO
K10352
myosin heavy chain 9/10/11/14
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04270
Vascular smooth muscle contraction
lcf04530
Tight junction
lcf04810
Regulation of actin cytoskeleton
lcf04814
Motor proteins
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108898651
09142 Cell motility
04814 Motor proteins
108898651
04820 Cytoskeleton in muscle cells
108898651
04810 Regulation of actin cytoskeleton
108898651
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108898651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108898651
04147 Exosome [BR:
lcf04147
]
108898651
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108898651
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
108898651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Myosin_head
Myosin_N
IQ
ADIP
TPR_MLP1_2
ERM_helical
Tropomyosin
Crescentin
AAA_22
Motif
Other DBs
NCBI-GeneID:
108898651
NCBI-ProteinID:
XP_050929657
LinkDB
All DBs
Position
LG11:17369188..17419643
Genome browser
AA seq
1989 aa
AA seq
DB search
MSHRSGQEDPERYLFVDRAVVYNPATQADWTAKKLVWVPSERHGFEAASIREERGEEVLV
ELAENGKKVVINKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLKDRYYSGLIYTYSGL
FCVVINPYKNLPIYSENIIEMYRGKKRHEMPPHIYAISESAYRCMLQDREDQSILCTGES
GAGKTENTKKVIQYLAHVASSHKGRKDHNIPPESPKAFKLQGELERQLLQANPILESFGN
AKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYRLLAG
AGEHLRTDLLLEGFNNYRFLSNGNIPIPGQQDKENFQETMEAMHIMSFSHDEIVCMLKVV
SAVLQFGNIVFKKERNTDQASMPENTAAQKLCHLLGMNVMEFTRAILTPRIKVGRDYVQK
AQTKEQADFAVEALAKATYERLFRWLVHRINKALDRTKRQGASFIGILDIAGFEIFELNS
FEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWSFIDFGLDLQPCIDLIERPTNPPG
ILALLDEECWFPKATDKTFVDKVLQEQGTHTKFQKPRQLKDKADFCIIHYAGRVDYKADE
WLMKNMDPLNDNVATLLHQSTDKFVAELWKDVDRIVGLDQVAGMNETAFGAAYKTKKGMF
RTVGQLYKEQLSKLMATLRNTNPNFVRCIIPNHEKRAGKLDPHLVLDQLRCNGVLEGIRI
CRQGFPNRIVFQEFRQRYEILTPNAIPKGFMDGKQACERMIQALELDGNLFRIGQSKIFF
RAGVLAHLEEERDLKITDIIIYFQAVCRGYLARKAFAKKQQQLSALKVLQRNCAAYLKLR
HWQWWRLFTKVKPLLQVTRQEEEMQAKDEELVKVKEKQTKVEGELMEMERKHQQLMEEKN
ILAEQLQAETELFAEAEEMRARLASKKQELEEILHDLESRLEEEEERTQGLQSEKKKMQS
HIQDLEEQLDEEEAARQKLQLEKVTAEAKMKKYEEDILLLEDQNSKFHKEKKLLEDRINE
MTSMLAEEEEKAKNLGKVKNKQEMMMVDLEERLKKEEKTRQELEKAKRKLDGETSDFQDQ
IAELHAQTEELKVQLAKKEEEQQMMQTRGEDEVSQKNNALKQVRELQAQLSELQEDLESE
KQARNKAEKLKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAELKKAIEEETKNH
EAQIQEMRQRHGTALEELSEQLEQAKRFKANLEKTKQSQETANKELANEVKSLQQAKTES
EHKRKKLEAQLQEFMARVTEGERAKGELADRTHKLQTELDNVSAMLEDAERKGIKMAKDV
AGLESQLQDSQELLQEETRQKLNLSSRIRQLEEEKNALQEQQEEDEEARKNLEKQMLTLQ
AQLSESKKKLEDDVGTIEALEEAKKKLQKDMELANQRLEEKTIAFEKMEKTKTRLQQELD
DLTVDLDHQRQIVSNLEKKQKKFDQMLAEEKSISARYAEERDRAEAEAREKETKALSMTR
ALDEALEAKEELERINKQLRAEMEDLMSSKDDVGKNVHELEKSKRTLEQQLEEMKTQLEE
LEDELQATEDAKLRLEVNMQAMKAQYERDLQGRDDQNDEKKRALVKQVREMEAELEDERK
QRALAVAAKKKLEMDLKDIEGHIEGANKARDEAIKQLRKLQAQMKDYQRELEDARASRDD
IFAISKENEKKLKSLEAEIVQLHEDLAASERGRRHAEQERDELQDEISNSTSGKSALMDE
KRRLEARIAQLEEELEEEQGNMELLNDRFRKTTMQVDTLTTELSAERSTAQKSENARQQL
ERQNKELRAKLGELEGSVKNRFKASITALEAKIAQLEEQLEQEAKERAAANKIVRRTEKK
LKEVCMQVEDERRHADQFKEQVEKANSRMKQLKRQLEEAEEEATRANASRRKLQRELDDA
TEASEGLSREVHTLKNRLRRGGPISFSSSRSGRRQLQVEGTSLDLLSDDELENKITDNNA
NETPVPQPE
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcggagtgggcaagaggacccagagcggtacctgtttgtggaccgggctgtg
gtttataacccagccacacaggctgactggacagccaagaagctggtgtgggtcccttca
gagcgccatggcttcgaggcagccagcatccgagaggagcgtggcgaggaggtgctggtg
gagctggccgagaatggcaagaaggtggtgatcaacaaggatgacatccagaagatgaac
ccacccaagttcagcaaggtggaagacatggccgagctcacctgcctgaatgaggcgtct
gtgctgcacaacttgaaggaccgctactactctggactcatatatacatactctggcctc
ttctgcgtggtcatcaacccctacaagaacctgcccatctattcagagaacatcattgag
atgtaccgagggaagaagaggcatgagatgcctccacacatctatgccatctctgagtca
gcatatcgctgcatgcttcaagatcgtgaggaccaatcaatcctttgcacaggtgaatca
ggcgctggcaagaccgagaacacgaagaaggtcatccagtacctggcccacgttgcctcc
tcacacaaaggacgcaaagaccacaacattcctcccgaatctcccaaagcattcaagcta
cagggtgagttggaacgccagctgctgcaagccaaccccatccttgaatcttttggcaat
gccaagacagtgaaaaatgacaactcatctcgcttcgggaaattcatcagaattaacttt
gacgtcacaggctacattgtcggggccaatattgaaacttaccttctggagaagtcaaga
gccattagacaggccaaagatgagaggaccttccacattttctaccgcctgctggcgggg
gctggagagcatctccgaacggacctgctccttgaaggctttaacaactaccgtttcctg
tcaaatggtaacattcccatccctggtcaacaggacaaagagaatttccaggagacaatg
gaggccatgcacatcatgagcttctcccatgatgagatcgtctgtatgttgaaggtggtc
tctgcagtgctgcagtttggcaacattgtctttaaaaaggagagaaacaccgatcaggcc
tccatgcctgagaacacagctgcacagaagctctgccacctgcttggaatgaatgttatg
gagttcaccagagctatcctcaccccgaggatcaaagtgggccgagactacgtgcagaag
gcacagaccaaagaacaggctgactttgctgttgaagccctggccaaggcaacatatgag
cggttgttccgatggctcgtccaccgcattaacaaggccctggacaggaccaaacgtcag
ggggcatcgttcattggcatcctggacatagctggctttgagatctttgagctgaactca
tttgagcagctttgtatcaactacaccaatgagaagctgcagcagctcttcaaccacacc
atgttcatcctggagcaggaggagtaccagagggagggcatcgagtggagcttcatcgac
tttggcctcgacctgcagccctgtatcgacctcattgagaggccgactaacccccctggt
attctcgccctgctggatgaagagtgttggtttcccaaggccaccgacaagacctttgta
gacaaagtgctgcaggagcagggcacgcacaccaagtttcagaagccacgtcagctcaag
gacaaagctgacttctgcatcattcactatgcagggagggtggactacaaagctgatgaa
tggcttatgaagaacatggatcctctaaatgacaatgtggccacactgctgcaccagtca
accgacaagtttgtggctgagctctggaaagatgttgaccggatcgtaggtcttgaccag
gttgcaggcatgaatgagacagctttcggtgccgcctataagactaagaagggcatgttc
cgcaccgtgggacagctgtacaaggagcagttgtctaagctgatggccacactgaggaac
accaacccaaactttgtccgctgcatcatccccaaccatgaaaaaagggctggtaaactg
gacccccacctggttctggatcagctgaggtgtaatggtgtgctggaggggatccgtatc
tgtagacagggcttccccaaccgcatcgtcttccaggagtttagacagaggtatgagatc
ctcactcctaatgccattcccaaaggctttatggatggcaagcaggcctgtgagagaatg
attcaagccctggagctggatggcaacctgtttcgaattggccagagtaagatcttcttc
agggctggagtcctggcccacctggaggaagaaagggacctgaagatcactgatatcata
atttacttccaggccgtctgccggggatatctggcacgcaaggcttttgctaagaagcag
cagcagctcagcgctctgaaagttcttcagaggaactgcgctgcctacttaaagctgcgt
cactggcagtggtggagactcttcactaaggtgaagcctctgctgcaggtgaccagacag
gaggaggagatgcaggctaaagatgaggagctggtgaaggtgaaggagaagcagaccaag
gtggagggagagctgatggagatggagaggaaacaccagcagttaatggaggaaaagaac
atcttagcagaacagctgcaggcagagacagagctgtttgcagaggccgaagagatgaga
gctcgtctggcctctaaaaagcaagagctggaggagatcctccatgacctggagtccagg
ctggaggaggaggaggagcggacccagggcctgcagagcgagaagaagaagatgcagtcc
catatccaggacctggaagaacagttggatgaggaggaggctgccaggcagaagctgcag
ctggagaaagtgacagctgaagccaaaatgaagaaatatgaagaggacattttgctactg
gaggaccagaactccaagttccacaaggaaaagaagctgttggaggaccgaatcaatgag
atgacctcaatgctagctgaagaggaggagaaggccaagaacctgggcaaagtcaagaac
aagcaggagatgatgatggtcgacctggaggagagattgaagaaggaggagaagacccgt
caggagctagagaaggctaagaggaagcttgatggggagacgtctgacttccaggaccag
atagctgagctacacgcccagacagaggagctgaaagttcaactagccaagaaggaagag
gagcagcagatgatgcagactaggggtgaggacgaggttagccagaagaacaatgctctg
aagcaggtgagggagctgcaggcccagctgtctgagctgcaggaggacctcgagtcagag
aagcaggcgaggaacaaggccgagaaactcaagagggacttgagtgaagagcttgaggcc
cttaaaactgaactagaagacacccttgatacaactgctgcccagcaggagcttaggacc
aagcgtgaacaggaggttgcagagctgaagaaggccattgaagaggagactaaaaaccat
gaggctcagattcaggagatgcgacagaggcacggcacagccttggaggagctgtctgaa
cagctggaacaggccaaaaggttcaaggctaacctggaaaagactaagcagagccaagag
actgccaacaaggagctagccaacgaggtcaagagcttgcagcaggcgaagaccgagtcc
gaacacaagaggaagaaactcgaggctcagctgcaggagttcatggctcgagtcaccgag
ggagagagggccaaaggagaactggccgaccgcacacacaaactgcagactgagttagac
aatgtgtcggccatgctggaagatgcagagagaaaggggatcaagatggccaaagatgtc
gctggactggagagtcaactacaagactcacaggagctgctccaagaggagacccgtcag
aaactaaacctcagcagtcgtatacggcagctggaggaggagaagaacgcactgcaggag
caacaggaggaggatgaggaggcgcgtaagaatctggagaaacagatgttgaccctacag
gctcagctatcagagagcaagaagaagctggaggatgatgttggaacaatagaggctctg
gaggaggctaagaagaaactgcagaaggacatggagctggccaaccagcgtctggaagag
aaaaccatcgcctttgaaaagatggagaagacaaaaactcgcctacaacaggagctggat
gatctaactgtagatttggatcaccagagacagattgtctccaacctggagaagaaacag
aagaagtttgaccagatgctggctgaggagaagagcatctcagctcgctatgctgaagaa
cgtgaccgcgctgaagctgaggccagagagaaggagaccaaagctctgtccatgaccaga
gctctggacgaggcattggaggctaaagaggagctggagaggattaacaagcagctccgt
gctgaaatggaagatctgatgagctcgaaggacgatgtgggcaagaatgtccacgagctg
gagaaatccaagcgtactctggagcaacagctggaggagatgaagactcagctggaggag
ctggaggatgagctgcaggccacagaagatgccaagctgcgtctggaggtcaacatgcag
gccatgaaggcccagtatgagagagaccttcagggtcgggatgaccagaatgatgagaag
aagagagcactggtcaagcaggtgcgagagatggaggcagagctggaagatgaaaggaag
cagagagctctggctgtagctgcaaagaagaaactggagatggatttgaaggatatagag
ggtcacatagaaggagccaacaaggctcgagatgaagccatcaaacagctgcgcaagcta
caggcccaaatgaaggactaccagagggagctggaagacgctcgagcctccagagatgat
atttttgccatatccaaggagaatgagaagaaactcaaaagtctggaggctgagattgta
cagctacatgaggatctggcagcgtctgagaggggacgacgccacgcagagcaggagcgg
gacgagctgcaagatgaaatctcaaacagcacctctggaaagtccgctctgatggatgag
aagaggaggctggaggctcgtatcgcccagctggaggaggagctggaggaggagcagggt
aacatggagctgctcaatgaccgcttcagaaagacaaccatgcaggtggacaccctgacc
acagagttgagtgcagagcgcagcacagcccagaagagcgaaaacgctcgccagcaactg
gagcgtcaaaacaaggagctccgggccaagctgggcgagctggagggttctgtgaagaac
aggttcaaggcctccatcactgccctggaggccaagatagcacagctggaggaacaactg
gagcaggaggccaaggagcgagcagcagccaataagattgtgaggaggaccgagaagaag
ctgaaggaggtctgcatgcaggtggaggatgagcgtcgccatgccgaccagtttaaagaa
caagtggaaaaggcaaactctcgtatgaagcagctgaagcgccagctggaggaggcagag
gaggaagccacaagagccaacgcctcacggaggaaattgcagagagagctggacgacgcc
accgaagccagtgagggtctgagccgcgaggtccacacactcaagaaccgcctcagacgt
ggcggccccatcagcttctcctccagtcgctcaggcagacgtcagctgcaggtggaggga
acttccttggacctcctgtctgacgacgagctggaaaacaagatcactgacaacaatgcc
aatgagacaccggtgccccagccggagtag
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integrated database retrieval system
